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Genome-wide association analysis identifies TXNRD2, ATXN2 and FOXC1 as susceptibility loci for primary open-angle glaucoma.

Authors :
Bailey JN
Loomis SJ
Kang JH
Allingham RR
Gharahkhani P
Khor CC
Burdon KP
Aschard H
Chasman DI
Igo RP Jr
Hysi PG
Glastonbury CA
Ashley-Koch A
Brilliant M
Brown AA
Budenz DL
Buil A
Cheng CY
Choi H
Christen WG
Curhan G
De Vivo I
Fingert JH
Foster PJ
Fuchs C
Gaasterland D
Gaasterland T
Hewitt AW
Hu F
Hunter DJ
Khawaja AP
Lee RK
Li Z
Lichter PR
Mackey DA
McGuffin P
Mitchell P
Moroi SE
Perera SA
Pepper KW
Qi Q
Realini T
Richards JE
Ridker PM
Rimm E
Ritch R
Ritchie M
Schuman JS
Scott WK
Singh K
Sit AJ
Song YE
Tamimi RM
Topouzis F
Viswanathan AC
Verma SS
Vollrath D
Wang JJ
Weisschuh N
Wissinger B
Wollstein G
Wong TY
Yaspan BL
Zack DJ
Zhang K
Study EN
Weinreb RN
Pericak-Vance MA
Small K
Hammond CJ
Aung T
Liu Y
Vithana EN
MacGregor S
Craig JE
Kraft P
Howell G
Hauser MA
Pasquale LR
Haines JL
Wiggs JL
Source :
Nature genetics [Nat Genet] 2016 Feb; Vol. 48 (2), pp. 189-94. Date of Electronic Publication: 2016 Jan 11.
Publication Year :
2016

Abstract

Primary open-angle glaucoma (POAG) is a leading cause of blindness worldwide. To identify new susceptibility loci, we performed meta-analysis on genome-wide association study (GWAS) results from eight independent studies from the United States (3,853 cases and 33,480 controls) and investigated the most significantly associated SNPs in two Australian studies (1,252 cases and 2,592 controls), three European studies (875 cases and 4,107 controls) and a Singaporean Chinese study (1,037 cases and 2,543 controls). A meta-analysis of the top SNPs identified three new associated loci: rs35934224[T] in TXNRD2 (odds ratio (OR) = 0.78, P = 4.05 × 10(-11)) encoding a mitochondrial protein required for redox homeostasis; rs7137828[T] in ATXN2 (OR = 1.17, P = 8.73 × 10(-10)); and rs2745572[A] upstream of FOXC1 (OR = 1.17, P = 1.76 × 10(-10)). Using RT-PCR and immunohistochemistry, we show TXNRD2 and ATXN2 expression in retinal ganglion cells and the optic nerve head. These results identify new pathways underlying POAG susceptibility and suggest new targets for preventative therapies.

Details

Language :
English
ISSN :
1546-1718
Volume :
48
Issue :
2
Database :
MEDLINE
Journal :
Nature genetics
Publication Type :
Academic Journal
Accession number :
26752265
Full Text :
https://doi.org/10.1038/ng.3482