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Complete chloroplast genome of Ficus racemosa (Moraceae).
- Source :
-
Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis [Mitochondrial DNA A DNA Mapp Seq Anal] 2016 Nov; Vol. 27 (6), pp. 4655-4656. Date of Electronic Publication: 2015 Dec 28. - Publication Year :
- 2016
-
Abstract
- Ficus racemosa, with immense medicinal value, and known as Cluster Fig Tree, Indian Fig Tree or Goolar (Gular) Figis, is a species of plant which belongs to family Moraceae. The complete chloroplast genome of Ficus racemosa was obtained by de novo assembly using next-generation sequencing data. The chloroplast genome of F. racemosa was 159 473 bp in length, which consisted of a large single region (88 110 bp), a small single copy region (20 007 bp) and a pair of invert repeat regions (25 678 bp). The overall GC content of this chloroplast genome was 36.0%. The chloroplast genome harbored 117 genes, including 84 protein-coding genes, 27 tRNA, and eight rRNA genes (4.5S rRNA, 5S rRNA, 16s rRNA and 23s rRNA) that were two copied. Phylogenetic analysis of the complete chloroplast genome sequences with the report-related chloroplast genomes revealed that Ficus racemosa is most closely related to Morus indica, a typical higher plant in fiamly Moraceae.
- Subjects :
- DNA, Chloroplast chemistry
DNA, Chloroplast isolation & purification
DNA, Chloroplast metabolism
Ficus classification
Inverted Repeat Sequences genetics
Phylogeny
Plant Proteins chemistry
Plant Proteins genetics
Plant Proteins metabolism
RNA, Ribosomal chemistry
RNA, Ribosomal genetics
RNA, Transfer chemistry
RNA, Transfer genetics
Sequence Analysis, DNA
Chloroplasts genetics
Ficus genetics
Genome, Chloroplast
Subjects
Details
- Language :
- English
- ISSN :
- 2470-1408
- Volume :
- 27
- Issue :
- 6
- Database :
- MEDLINE
- Journal :
- Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis
- Publication Type :
- Academic Journal
- Accession number :
- 26709634
- Full Text :
- https://doi.org/10.3109/19401736.2015.1106488