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Comparative analytical evaluation of the respiratory TaqMan Array Card with real-time PCR and commercial multi-pathogen assays.
- Source :
-
Journal of virological methods [J Virol Methods] 2016 Feb; Vol. 228, pp. 151-7. Date of Electronic Publication: 2015 Nov 27. - Publication Year :
- 2016
-
Abstract
- In this study, a multicenter evaluation of the Life Technologies TaqMan(®) Array Card (TAC) with 21 custom viral and bacterial respiratory assays was performed on the Applied Biosystems ViiA™ 7 Real-Time PCR System. The goal of the study was to demonstrate the analytical performance of this platform when compared to identical individual pathogen specific laboratory developed tests (LDTs) designed at the Centers for Disease Control and Prevention (CDC), equivalent LDTs provided by state public health laboratories, or to three different commercial multi-respiratory panels. CDC and Association of Public Health Laboratories (APHL) LDTs had similar analytical sensitivities for viral pathogens, while several of the bacterial pathogen APHL LDTs demonstrated sensitivities one log higher than the corresponding CDC LDT. When compared to CDC LDTs, TAC assays were generally one to two logs less sensitive depending on the site performing the analysis. Finally, TAC assays were generally more sensitive than their counterparts in three different commercial multi-respiratory panels. TAC technology allows users to spot customized assays and design TAC layout, simplify assay setup, conserve specimen, dramatically reduce contamination potential, and as demonstrated in this study, analyze multiple samples in parallel with good reproducibility between instruments and operators.<br /> (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Subjects :
- Bacteria genetics
Bacteria isolation & purification
Centers for Disease Control and Prevention, U.S.
Humans
Microfluidics methods
Microfluidics standards
Real-Time Polymerase Chain Reaction instrumentation
Reproducibility of Results
Respiratory Tract Infections diagnosis
Respiratory Tract Infections microbiology
Respiratory Tract Infections virology
Sensitivity and Specificity
United States
Viruses genetics
Viruses isolation & purification
Oligonucleotide Array Sequence Analysis standards
Real-Time Polymerase Chain Reaction methods
Real-Time Polymerase Chain Reaction standards
Subjects
Details
- Language :
- English
- ISSN :
- 1879-0984
- Volume :
- 228
- Database :
- MEDLINE
- Journal :
- Journal of virological methods
- Publication Type :
- Academic Journal
- Accession number :
- 26640122
- Full Text :
- https://doi.org/10.1016/j.jviromet.2015.11.020