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Glaciimonas frigoris s p. nov., a psychrophilic bacterium isolated from ancient Siberian permafrost sediment, and emended description of the genus Glaciimonas .

Authors :
Margesin R
Zhang DC
Frasson D
Brouchkov A
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2016 Feb; Vol. 66 (2), pp. 744-748. Date of Electronic Publication: 2015 Nov 23.
Publication Year :
2016

Abstract

The bacterial strain N1-38 <superscript>T</superscript> was isolated from ancient Siberian permafrost sediment. The strain was Gram-reaction-negative, motile by gliding, rod-shaped and psychrophilic, and showed good growth over a temperature range of - 5 to 25 °C. Phylogenetic analysis of 16S rRNA gene sequences revealed that strain N1-38 <superscript>T</superscript> was most closely related to members of the genus Glaciimonas and shared the highest 16S rRNA gene sequence similarities with the type strains of Glaciimonas alpina (99.3 %), Glaciimonas immobilis (98.9 %) and Glaciimonas singularis (96.5 %). The predominant cellular fatty acids of strain N1-38 <superscript>T</superscript> were summed feature 3 (C <subscript>16 : 1</subscript> ω7 c and/or iso-C <subscript>15 : 0</subscript> 2-OH), C <subscript>16 : 0</subscript> and C <subscript>18 : 1</subscript> ω7 c . The major respiratory quinone was ubiquinone 8 and the major polar lipids were phosphatidylethanolamine and diphosphatidylglycerol. The genomic DNA G+C content was 53.0 mol%. Combined data of phenotypic, phylogenetic and DNA-DNA relatedness studies demonstrated that strain N1-38 <superscript>T</superscript> represents a novel species of the genus Glaciimonas , for which the name Glaciimonas frigoris sp. nov. is proposed. The type strain is N1-38 <superscript>T</superscript> ( = LMG 28868 <superscript>T</superscript>  = CCOS 838 <superscript>T</superscript> ). An emended description of the genus Glaciimonas is also provided.

Details

Language :
English
ISSN :
1466-5034
Volume :
66
Issue :
2
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
26597157
Full Text :
https://doi.org/10.1099/ijsem.0.000783