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Sphingomonas arantia sp. nov., isolated from Hoh Xil basin, China.
- Source :
-
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2015 Dec; Vol. 108 (6), pp. 1341-1347. Date of Electronic Publication: 2015 Sep 12. - Publication Year :
- 2015
-
Abstract
- A Gram-negative, rod-shaped, non-motile, non-spore forming, aerobic, orange-pigmented bacterium, designated strain 6P(T), was isolated from a soil sample collected from the Hoh Xil basin, China. Strain 6P(T) grew optimally at 25 °C, pH 7.0-7.5 and NaCl concentration of 0-1 % (w/v). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 6P(T) belongs to the genus Sphingomonas, with high sequence similarity (97.1 %) to Sphingomonas fennica. The DNA-DNA hybridization homology with S. fennica DSM 13665(T) was 45.3 %. The DNA G+C content of the novel strain is 65.3 mol%. The isolate contained Q-10 as the only respiratory quinone. The major polar lipids are diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), phosphatidylcholine (PC) and sphingoglycolipid (SGL). C18:1 ω7c and C16:1 ω7c are the major fatty acids. On the basis of the polyphasic evidence presented, strain 6P(T) represents a novel species of the genus Sphingomonas, for which the name Sphingomonas arantia sp. nov. is proposed. The type strain is 6P(T) (=CGMCC 1.12702(T) = JCM 19855(T)).
- Subjects :
- Aerobiosis
Animals
Bacterial Typing Techniques
Base Composition
China
Cluster Analysis
Cytosol chemistry
DNA, Bacterial chemistry
DNA, Bacterial genetics
DNA, Ribosomal chemistry
DNA, Ribosomal genetics
Fatty Acids analysis
Glycolipids analysis
Hydrogen-Ion Concentration
Molecular Sequence Data
Nucleic Acid Hybridization
Phospholipids analysis
Phylogeny
Pigments, Biological analysis
Quinones analysis
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Sodium Chloride metabolism
Sphingomonas genetics
Sphingomonas physiology
Temperature
Sphingomonas classification
Sphingomonas isolation & purification
Subjects
Details
- Language :
- English
- ISSN :
- 1572-9699
- Volume :
- 108
- Issue :
- 6
- Database :
- MEDLINE
- Journal :
- Antonie van Leeuwenhoek
- Publication Type :
- Academic Journal
- Accession number :
- 26363912
- Full Text :
- https://doi.org/10.1007/s10482-015-0586-0