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Strand separation establishes a sustained lock at the Tus-Ter replication fork barrier.

Authors :
Berghuis BA
Dulin D
Xu ZQ
van Laar T
Cross B
Janissen R
Jergic S
Dixon NE
Depken M
Dekker NH
Source :
Nature chemical biology [Nat Chem Biol] 2015 Aug; Vol. 11 (8), pp. 579-85. Date of Electronic Publication: 2015 Jul 06.
Publication Year :
2015

Abstract

The bidirectional replication of a circular chromosome by many bacteria necessitates proper termination to avoid the head-on collision of the opposing replisomes. In Escherichia coli, replisome progression beyond the termination site is prevented by Tus proteins bound to asymmetric Ter sites. Structural evidence indicates that strand separation on the blocking (nonpermissive) side of Tus-Ter triggers roadblock formation, but biochemical evidence also suggests roles for protein-protein interactions. Here DNA unzipping experiments demonstrate that nonpermissively oriented Tus-Ter forms a tight lock in the absence of replicative proteins, whereas permissively oriented Tus-Ter allows nearly unhindered strand separation. Quantifying the lock strength reveals the existence of several intermediate lock states that are impacted by mutations in the lock domain but not by mutations in the DNA-binding domain. Lock formation is highly specific and exceeds reported in vivo efficiencies. We postulate that protein-protein interactions may actually hinder, rather than promote, proper lock formation.

Details

Language :
English
ISSN :
1552-4469
Volume :
11
Issue :
8
Database :
MEDLINE
Journal :
Nature chemical biology
Publication Type :
Academic Journal
Accession number :
26147356
Full Text :
https://doi.org/10.1038/nchembio.1857