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Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase.
- Source :
-
Biochemical and biophysical research communications [Biochem Biophys Res Commun] 2014 Sep 26; Vol. 452 (3), pp. 509-14. Date of Electronic Publication: 2014 Aug 27. - Publication Year :
- 2014
-
Abstract
- Oxidized polyvinyl alcohol hydrolase (OPH) catalyzes the cleavage of C-C bond in β-diketone. It belongs to the α/β-hydrolase family and contains a unique lid region that covers the active site. The lid is the most variable region when pOPH from Pseudomonas sp. VM15C and sOPH from Sphingopyxis sp. 113P3 are compared. The wild-type enzymes and the pOPH mutants W255A, W255Y and W255F were analyzed for lipase activity by using p-nitrophenyl (pNP) esters as the substrates. The wild-type enzymes showed increased Km and decreased kcat/Km with the acyl chain length, and the mutants showed reduced kcat/Km for pNP acetate, indicating the importance of Trp255 in sequestering the active site from solvent. The significantly lower activity for pNP butyrate can be a result of product inhibition, as suggested by the complex crystal structures, in which butyric acid, DMSO or PEG occupied the same substrate-binding cleft. The mutant activity was retained with pNP caprylate and pNP laurate as the substrates, reflecting the amphipathic nature of the cleft. Moreover, the disulfide bond formation of Cys257/267 is important for the activity of pOPH, but it is not essential for sOPH, which has a shorter lid structure.<br /> (Copyright © 2014 Elsevier Inc. All rights reserved.)
- Subjects :
- Bacterial Proteins genetics
Bacterial Proteins metabolism
Butyrates chemistry
Butyrates metabolism
Caprylates chemistry
Caprylates metabolism
Carboxylic Ester Hydrolases genetics
Carboxylic Ester Hydrolases metabolism
Catalytic Domain
Crystallography, X-Ray
Escherichia coli genetics
Escherichia coli metabolism
Gene Expression
Hydrophobic and Hydrophilic Interactions
Kinetics
Laurates chemistry
Laurates metabolism
Models, Molecular
Mutagenesis, Site-Directed
Pseudomonas enzymology
Recombinant Proteins chemistry
Recombinant Proteins genetics
Recombinant Proteins metabolism
Sphingomonas enzymology
Static Electricity
Substrate Specificity
Tryptophan metabolism
Bacterial Proteins chemistry
Carboxylic Ester Hydrolases chemistry
Disulfides chemistry
Pseudomonas chemistry
Sphingomonas chemistry
Tryptophan chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1090-2104
- Volume :
- 452
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Biochemical and biophysical research communications
- Publication Type :
- Academic Journal
- Accession number :
- 25173935
- Full Text :
- https://doi.org/10.1016/j.bbrc.2014.08.106