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Hoppeia youngheungensis gen. nov., sp. nov., a member of the Flavobacteriaceae isolated from tidal flat sediment, and emended descriptions of the genus Sediminibacter and Sediminibacter furfurosus.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2014 Jun; Vol. 64 (Pt 6), pp. 2053-2059. Date of Electronic Publication: 2014 Mar 24. - Publication Year :
- 2014
-
Abstract
- A Gram-reaction-negative, proteorhodopsin-containing, yellow-pigmented, rod-shaped, non-gliding and strictly aerobic bacterium, designated strain YIK12(T), was isolated from tidal flat sediment of Yeongheung Island at the coast of the West Sea of Korea. Cells produced non-diffusible carotenoid pigments, but not flexirubin-type pigment. Phylogenetic analyses based on 16S rRNA gene sequences indicated that the isolate was affiliated to the family Flavobacteriaceae and showed highest similarity to Sediminibacter furfurosus MAOS-86(T) (93.3%). Growth was observed at 24-44 °C (optimum 30 °C), at pH 6.5-8.0 (optimum 7.0) and in the presence of 1.5-7.0% sea salts (optimum 2%). The DNA G+C content was 40.4 mol% and the predominant cellular fatty acids were iso-C(15 : 0), iso-C(15 : 1) G, iso-C(17 : 0) 3-OH, iso-C(16 : 0) 3-OH, anteiso-C(15 : 0) and iso-C(15 : 0) 3-OH. The major respiratory quinone was MK-6. On the basis of data from the present polyphasic taxonomic study, strain YIK12(T) is considered to represent a novel species of a new genus in the family Flavobacteriaceae, for which the name Hoppeia youngheungensis gen. nov., sp. nov. is proposed. The type strain of H. youngheungensis is YIK12(T) ( = KCCM 43023(T) = JCM 19488(T)). Emended descriptions of the genus Sediminibacter and Sediminibacter furfurosus are given.<br /> (© 2014 IUMS.)
- Subjects :
- Bacterial Typing Techniques
Base Composition
Carotenoids chemistry
DNA, Bacterial genetics
Fatty Acids chemistry
Flavobacteriaceae genetics
Flavobacteriaceae isolation & purification
Molecular Sequence Data
Pigmentation
RNA, Ribosomal, 16S genetics
Republic of Korea
Sequence Analysis, DNA
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Flavobacteriaceae classification
Geologic Sediments microbiology
Phylogeny
Seawater microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 64
- Issue :
- Pt 6
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 24664578
- Full Text :
- https://doi.org/10.1099/ijs.0.061721-0