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Long non-coding RNAs: new players in ocular neovascularization.
- Source :
-
Molecular biology reports [Mol Biol Rep] 2014 Jul; Vol. 41 (7), pp. 4493-505. Date of Electronic Publication: 2014 Mar 13. - Publication Year :
- 2014
-
Abstract
- Pathological neovascularization are the most prevalent causes of moderate or severe vision loss. Long non-coding RNAs (lncRNAs) have emerged as a novel class of regulatory molecules involved in numerous biological processes and complicated diseases. However, the role of lncRNAs in ocular neovascularization is still unclear. Here, we constructed a murine model of ocular neovascularization, and determined lncRNA expression profiles using microarray analysis. We identified 326 or 51 lncRNAs that were significantly either up-regulated or down-regulated in the vaso-obliteration or neovascularization phase, respectively. Based on Pearson correlation analysis, lncRNAs/mRNAs co-expression networks were constructed. GO enrichment analysis of lncRNAs-co-expressed mRNAs indicated that the biological modules were correlated with chromosome organization, extracellular region and guanylate cyclase activator activity in the vaso-obliteration phase, and correlated with cell proliferation, extracellular region and guanylate cyclase regulator activity in the neovascularization phase. KEGG pathway analysis indicated that MAPK signaling was the most significantly enriched pathway in both phases. Importantly, Vax2os1 and Vax2os2 were not only dynamically expressed in the vaso-obliteration and neovascularization phases, but also significantly altered in the aqueous humor of patients with neovascular age-related macular degeneration (AMD), suggesting a potential role of lncRNAs in the regulation of ocular neovascularization. Taken together, this study provided novel insights into the molecular pathogenesis of ocular neovascularization. The intervention of dysregulated lncRNA could become a potential target for the prevention and treatment of ocular vascular diseases.
- Subjects :
- Aged
Animals
Aqueous Humor metabolism
Female
Gene Expression Profiling
Gene Expression Regulation
Gene Regulatory Networks
Guanylate Cyclase-Activating Proteins genetics
Guanylate Cyclase-Activating Proteins metabolism
Homeodomain Proteins genetics
Homeodomain Proteins metabolism
Humans
Hyperoxia metabolism
Hyperoxia pathology
MAP Kinase Signaling System
Macular Degeneration metabolism
Macular Degeneration pathology
Male
Mice
Middle Aged
Neovascularization, Pathologic metabolism
Neovascularization, Pathologic pathology
Oligonucleotide Array Sequence Analysis
Protein Isoforms genetics
Protein Isoforms metabolism
RNA, Long Noncoding genetics
RNA, Messenger metabolism
Retina pathology
Hyperoxia genetics
Macular Degeneration genetics
Neovascularization, Pathologic genetics
RNA, Long Noncoding metabolism
RNA, Messenger genetics
Retina metabolism
Subjects
Details
- Language :
- English
- ISSN :
- 1573-4978
- Volume :
- 41
- Issue :
- 7
- Database :
- MEDLINE
- Journal :
- Molecular biology reports
- Publication Type :
- Academic Journal
- Accession number :
- 24623407
- Full Text :
- https://doi.org/10.1007/s11033-014-3320-5