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Fragmented mitochondrial genomes of the rat lice, Polyplax asiatica and Polyplax spinulosa: intra-genus variation in fragmentation pattern and a possible link between the extent of fragmentation and the length of life cycle.
- Source :
-
BMC genomics [BMC Genomics] 2014 Jan 18; Vol. 15, pp. 44. Date of Electronic Publication: 2014 Jan 18. - Publication Year :
- 2014
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Abstract
- Background: Blood-sucking lice (suborder Anoplura) parasitize eutherian mammals with 67% of the 540 described species found on rodents. The five species of blood-sucking lice that infest humans and pigs have fragmented mitochondrial genomes and differ substantially in the extent of fragmentation. To understand whether, or not, any life-history factors are linked to such variation, we sequenced the mt genomes of Polyplax asiatica and Polyplax spinulosa, collected from the greater bandicoot rat, Bandicota indica, and the Asian house rat, Rattus tanezumi, respectively.<br />Results: We identified all of the 37 mitochondrial genes common to animals in Polyplax asiatica and Polyplax spinulosa. The mitochondrial genes of these two rat lice are on 11 circular minichromosomes; each minichromosome is 2-4 kb long and has 2-7 genes. The two rat lice share the same pattern for the distribution of the protein-coding genes and ribosomal RNA genes over the minichromosomes, but differ in the pattern for the distribution of 8 of the 22 transfer RNA genes. The mitochondrial genomes of the Polyplax rat lice have 3.4 genes, on average, on each minichromosome and, thus, are less fragmented than those of the human lice (2.1 and 2.4 genes per minichromosome), but are more fragmented than those of the pig lice (4.1 genes per minichromosome).<br />Conclusions: Our results revealed distinct patterns of mitochondrial genome fragmentation within the genus Polyplax and, furthermore, indicated a possible inverse link between the extent of mitochondrial genome fragmentation and the length of life cycle of the blood-sucking lice.
- Subjects :
- Animals
Base Sequence
DNA Fragmentation
Evolution, Molecular
Molecular Sequence Data
Nucleic Acid Conformation
Open Reading Frames genetics
RNA, Ribosomal genetics
RNA, Transfer chemistry
RNA, Transfer metabolism
Rats
Sequence Alignment
Untranslated Regions
Anoplura genetics
Anoplura growth & development
Genome, Mitochondrial
Life Cycle Stages genetics
Mitochondria genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1471-2164
- Volume :
- 15
- Database :
- MEDLINE
- Journal :
- BMC genomics
- Publication Type :
- Academic Journal
- Accession number :
- 24438034
- Full Text :
- https://doi.org/10.1186/1471-2164-15-44