Back to Search
Start Over
Ramlibacter solisilvae sp. nov., isolated from forest soil, and emended description of the genus Ramlibacter.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2014 Apr; Vol. 64 (Pt 4), pp. 1317-1322. Date of Electronic Publication: 2014 Jan 14. - Publication Year :
- 2014
-
Abstract
- A Gram-staining-negative, strictly aerobic, white-colony-forming bacterium, designated strain 5-10(T), was isolated from forest soil of Bac Kan Province in Vietnam. Cells were non-motile rods or coccoids, showing oxidase- and catalase-positive reactions. Growth was observed at 10-37 °C (optimum, 30 °C), at pH 5.0-9.0 (optimum, pH 7.0) and in the presence of 0-1.0 % (w/v) NaCl (optimum, 0-0.5 %). The major cellular fatty acids were summed feature 3 (comprising C16 : 1ω6c and/or C16 : 1ω7c), C16 : 0, C10 : 0 3-OH and summed feature 8 (comprising C18 : 1ω6c and/or C18 : 1ω7c). The G+C content of the genomic DNA was 69.9 mol% and the only respiratory quinone detected was ubiquinone 8 (Q-8). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 5-10(T) formed a tight phyletic lineage with members of the genus Ramlibacter. Strain 5-10(T) was most closely related to Ramlibacter tataouinensis TTB310(T) (97.3 %), but the DNA-DNA relatedness level between the two strains was 38.2±1.8 %. Based on phenotypic, chemotaxonomic and molecular features, strain 5-10(T) was shown to represent a novel species of the genus Ramlibacter, for which the name Ramlibacter solisilvae sp. nov. is proposed. The type strain is 5-10(T) ( = KACC 17567(T) = JCM 19319(T)). An emended description of the genus Ramlibacter is also proposed.
- Subjects :
- Bacterial Typing Techniques
Base Composition
Comamonadaceae genetics
Comamonadaceae isolation & purification
DNA, Bacterial genetics
Fatty Acids chemistry
Molecular Sequence Data
Nucleic Acid Hybridization
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Ubiquinone chemistry
Vietnam
Comamonadaceae classification
Phylogeny
Soil Microbiology
Trees microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 64
- Issue :
- Pt 4
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 24425747
- Full Text :
- https://doi.org/10.1099/ijs.0.058396-0