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Complete genome sequence of Halorhodospira halophila SL1.

Authors :
Challacombe JF
Majid S
Deole R
Brettin TS
Bruce D
Delano SF
Detter JC
Gleasner CD
Han CS
Misra M
Reitenga KG
Mikhailova N
Woyke T
Pitluck S
Nolan M
Land ML
Saunders E
Tapia R
Lapidus A
Ivanova N
Hoff WD
Source :
Standards in genomic sciences [Stand Genomic Sci] 2013 Apr 15; Vol. 8 (2), pp. 206-14. Date of Electronic Publication: 2013 Apr 15 (Print Publication: 2013).
Publication Year :
2013

Abstract

Halorhodospira halophila is among the most halophilic organisms known. It is an obligately photosynthetic and anaerobic purple sulfur bacterium that exhibits autotrophic growth up to saturated NaCl concentrations. The type strain H. halophila SL1 was isolated from a hypersaline lake in Oregon. Here we report the determination of its entire genome in a single contig. This is the first genome of a phototrophic extreme halophile. The genome consists of 2,678,452 bp, encoding 2,493 predicted genes as determined by automated genome annotation. Of the 2,407 predicted proteins, 1,905 were assigned to a putative function. Future detailed analysis of this genome promises to yield insights into the halophilic adaptations of this organism, its ability for photoautotrophic growth under extreme conditions, and its characteristic sulfur metabolism.

Details

Language :
English
ISSN :
1944-3277
Volume :
8
Issue :
2
Database :
MEDLINE
Journal :
Standards in genomic sciences
Publication Type :
Academic Journal
Accession number :
23991253
Full Text :
https://doi.org/10.4056/sigs.3677284