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Pseudomonas asturiensis sp. nov., isolated from soybean and weeds.

Authors :
González AJ
Cleenwerck I
De Vos P
Fernández-Sanz AM
Source :
Systematic and applied microbiology [Syst Appl Microbiol] 2013 Jul; Vol. 36 (5), pp. 320-4. Date of Electronic Publication: 2013 May 30.
Publication Year :
2013

Abstract

Five strains of gram negative bacteria, isolated from soybean (LPPA 221(T), 222 and 223) and weeds (LPPA 816 and 1442), were analyzed by a polyphasic approach. The isolates showed variation in their phenotypic traits and were placed in the Pseudomonas fluorescens lineage, based on 16S rRNA gene sequence phylogeny, as a single but well separated cluster. MLSA analysis based on gyrB and rpoD sequences clustered the strains in a single branch in the Pseudomonas syringae group, and revealed P. viridiflava as closest relative. DNA-DNA hybridizations showed medium levels of DNA-DNA relatedness with the type strain of P. viridiflava (50%) and lower levels (<32%) with other type strains of the P. syringae group, supporting classification within a novel species of the genus Pseudomonas. The strains can be distinguished from species of the P. syringae group by the fatty acid C17:0 cyclo that is present in a low amount (2.5%) and from P. viridiflava by their inability to assimilate d-tartrate and d-sorbitol, and by the formation of red colonies on TTC medium. For this new species, the name Pseudomonas asturiensis sp. nov. is proposed. The type strain is LPPA 221(T) (=LMG 26898(T)=CECT 8095(T)).<br /> (Copyright © 2013 Elsevier GmbH. All rights reserved.)

Details

Language :
English
ISSN :
1618-0984
Volume :
36
Issue :
5
Database :
MEDLINE
Journal :
Systematic and applied microbiology
Publication Type :
Academic Journal
Accession number :
23727430
Full Text :
https://doi.org/10.1016/j.syapm.2013.04.004