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Microbacterium saccharophilum sp. nov., isolated from a sucrose-refining factory.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2013 Aug; Vol. 63 (Pt 8), pp. 2765-2769. Date of Electronic Publication: 2013 Jan 11. - Publication Year :
- 2013
-
Abstract
- A Gram-stain-positive, non-motile, non-spore-forming, rod-shaped bacterium, designated strain K-1(T), was isolated from soil at a sucrose refinery in Japan. The strain grew at 9-37 °C (optimum, 30 °C) and at pH 6-11 (optimum, pH 7.0). Phylogenetic analysis based on the full-length 16S rRNA gene sequence of strain K-1(T) revealed that it was a member of the genus Microbacterium. High 16S rRNA gene sequence similarities were found between strains K-1(T) and both Microbacterium pumilum NBRC 101279(T) (99.7 %) and Microbacterium deminutum NRRL B-24453(T) (99.5 %). However, the DNA-DNA hybridization values between strain K-1(T) and M. pumilum NBRC 101279(T) and M. deminutum NRRL B-24453(T) were only 12 % and 10 %, respectively. The DNA G+C content of strain K-1(T) was 73 mol%. The major fatty acids of strain K-1(T) were anteiso-C15 : 0 and anteiso-C17 : 0, and the major menaquinones were MK-12 and MK-13. The diamino acid in the cell-wall peptidoglycan was lysine. On the basis of these results, strain K-1(T) is considered to represent a novel species of the genus Microbacterium, for which the name Microbacterium saccharophilum sp. nov. is proposed. The type strain is K-1(T) (= NBRC 108778(T) = NCIMB 14782(T)).
- Subjects :
- Actinomycetales genetics
Actinomycetales isolation & purification
Bacterial Typing Techniques
Base Composition
DNA, Bacterial genetics
Fatty Acids analysis
Japan
Lysine analysis
Molecular Sequence Data
Nucleic Acid Hybridization
Peptidoglycan analysis
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Vitamin K 2 analysis
Actinomycetales classification
Phylogeny
Soil Microbiology
Sucrose metabolism
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 63
- Issue :
- Pt 8
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 23315408
- Full Text :
- https://doi.org/10.1099/ijs.0.047258-0