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The entire miR-200 seed family is strongly deregulated in clear cell renal cell cancer compared to the proximal tubular epithelial cells of the kidney.
- Source :
-
Genes, chromosomes & cancer [Genes Chromosomes Cancer] 2013 Feb; Vol. 52 (2), pp. 165-73. Date of Electronic Publication: 2012 Oct 17. - Publication Year :
- 2013
-
Abstract
- Despite numerous studies reporting deregulated microRNA (miRNA) and gene expression patterns in clear cell renal cell carcinoma (ccRCC), no direct comparisons have been made to its presumed normal counterpart: the renal proximal tubular epithelial cells (PTECs). The aim of this study was to determine the miRNA expression profiles of 10 ccRCC-derived cell lines and short-term cultures of PTEC and to correlate these with their gene expression and copy-number profiles. Using microarray-based methods, a significantly altered expression level in ccRCC cell lines was observed for 23 miRNAs and 1630 genes. The set of miRNAs with significantly decreased expression levels include all members of the miR-200 family known to be involved in the epithelial to mesenchymal transition process. Expression levels of 13 of the 47 validated target genes for the downregulated miRNAs were increased more than twofold. Our data reinforce the importance of the epithelial to mesenchymal transition process in the development of ccRCC.<br /> (Copyright © 2012 Wiley Periodicals, Inc.)
- Subjects :
- Carcinoma, Renal Cell metabolism
Carcinoma, Renal Cell pathology
Cell Line, Tumor
Chromosome Aberrations
DNA Copy Number Variations
Epithelial Cells pathology
Epithelial-Mesenchymal Transition genetics
Gene Expression Profiling
Gene Expression Regulation, Neoplastic
Humans
Immunohistochemistry
Kidney Neoplasms metabolism
Kidney Neoplasms pathology
Kidney Tubules, Proximal pathology
Oligonucleotide Array Sequence Analysis
Vimentin genetics
Vimentin metabolism
beta Catenin genetics
beta Catenin metabolism
Carcinoma, Renal Cell genetics
Epithelial Cells metabolism
Kidney Neoplasms genetics
Kidney Tubules, Proximal metabolism
MicroRNAs genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1098-2264
- Volume :
- 52
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- Genes, chromosomes & cancer
- Publication Type :
- Academic Journal
- Accession number :
- 23074016
- Full Text :
- https://doi.org/10.1002/gcc.22016