KASpOD--a web service for highly specific and explorative oligonucleotide design.

Authors :: Parisot N
Denonfoux J
Dugat-Bony E
Peyret P
Peyretaillade E
Source :: Bioinformatics (Oxford, England) [Bioinformatics] 2012 Dec 01; Vol. 28 (23), pp. 3161-2. Date of Electronic Publication: 2012 Oct 09.
Publication Year :: 2012
Abstract: Summary: KASpOD is a web service dedicated to the design of signature sequences using a k-mer-based algorithm. Such highly specific and explorative oligonucleotides are then suitable for various goals, including Phylogenetic Oligonucleotide Arrays.<br />Availability: http://g2im.u-clermont1.fr/kaspod.<br />Contact: eric.peyretaillade@udamail.fr<br />Supplementary Information: Supplementary data are available at Bioinformatics online.

Subjects :: Cluster Analysis
Oligonucleotide Probes genetics
Algorithms
Internet
Oligonucleotide Array Sequence Analysis methods
Software

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