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Complete genome sequence of a novel human parechovirus.
- Source :
-
Journal of virology [J Virol] 2012 Nov; Vol. 86 (21), pp. 11945-6. - Publication Year :
- 2012
-
Abstract
- Human parechoviruses (HPeVs) belonging to the family Picornaviridae are widely spread pathogens among young children. We report the complete genome sequence of a novel HPeV isolated from the stool sample of a hospitalized child with diarrhea in China. The genome consists of 7,305 nucleotides, excluding the 3' poly(A) tail, and has an open reading frame that maps between nucleotide positions 675 and 7217 and encodes a 2,180-amino-acid polyprotein. The genome sequence of the virus was sufficiently distinct from the 8 known HPeV types. Phylogenetic analysis based on the complete genome indicated that the HPeV strain represents a new genotype.
- Subjects :
- Child, Hospitalized
Child, Preschool
China
Cluster Analysis
Diarrhea virology
Feces virology
Humans
Molecular Sequence Data
Open Reading Frames
Parechovirus classification
Parechovirus isolation & purification
Phylogeny
Picornaviridae Infections virology
Polyproteins genetics
Viral Proteins genetics
Genome, Viral
Parechovirus genetics
RNA, Viral genetics
Sequence Analysis, DNA
Subjects
Details
- Language :
- English
- ISSN :
- 1098-5514
- Volume :
- 86
- Issue :
- 21
- Database :
- MEDLINE
- Journal :
- Journal of virology
- Publication Type :
- Academic Journal
- Accession number :
- 23043176
- Full Text :
- https://doi.org/10.1128/JVI.02099-12