Back to Search Start Over

Coarse-Grained Molecular Models of Water: A Review.

Authors :
Hadley KR
McCabe C
Source :
Molecular simulation [Mol Simul] 2012 Jul; Vol. 38 (8-9), pp. 671-681. Date of Electronic Publication: 2012 Jul 04.
Publication Year :
2012

Abstract

Coarse-grained (CG) models have proven to be very effective tools in the study of phenomena or systems that involve large time- and length-scales. By decreasing the degrees of freedom in the system and using softer interactions than seen in atomistic models, larger timesteps can be used and much longer simulation times can be studied. CG simulations are widely used to study systems of biological importance that are beyond the reach of atomistic simulation, necessitating a computationally efficient and accurate CG model for water. In this review, we discuss the methods used for developing CG water models and the relative advantages and disadvantages of the resulting models. In general, CG water models differ with regards to how many waters each CG group or bead represents, whether analytical or tabular potentials have been used to describe the interactions, and how the model incorporates electrostatic interactions. Finally, how the models are parameterized depends on their application, so, while some are fitted to experimental properties such as surface tension and density, others are fitted to radial distribution functions extracted from atomistic simulations.

Details

Language :
English
ISSN :
0892-7022
Volume :
38
Issue :
8-9
Database :
MEDLINE
Journal :
Molecular simulation
Publication Type :
Academic Journal
Accession number :
22904601
Full Text :
https://doi.org/10.1080/08927022.2012.671942