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Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRP(T)).

Authors :
Copeland A
Zeytun A
Yassawong M
Nolan M
Lucas S
Hammon N
Deshpande S
Cheng JF
Han C
Tapia R
Goodwin LA
Pitluck S
Mavromatis K
Liolios K
Pagani I
Ivanova N
Mikhailova N
Pati A
Chen A
Palaniappan K
Land M
Hauser L
Jeffries CD
Brambilla EM
Rohde M
Sikorski J
Pukall R
Göker M
Detter JC
Woyke T
Bristow J
Eisen JA
Markowitz V
Hugenholtz P
Kyrpides NC
Klenk HP
Lapidus A
Source :
Standards in genomic sciences [Stand Genomic Sci] 2012 May 25; Vol. 6 (2), pp. 240-50. Date of Electronic Publication: 2012 Apr 27.
Publication Year :
2012

Abstract

Deinococcus proteolyticus (ex Kobatake et al. 1973) Brook and Murray 1981 is one of currently 47 species in the genus Deinococcus within the family Deinococcaceae. Strain MRP(T) was isolated from feces of Lama glama and possesses extreme radiation resistance, a trait is shares with various other species of the genus Deinococcus, with D. proteolyticus being resistant up to 1.5 Mrad of gamma radiation. Strain MRP(T) is of further interest for its carotenoid pigment. The genome presented here is only the fifth completed genome sequence of a member of the genus Deinococcus (and the forth type strain) to be published, and will hopefully contribute to a better understanding of how members of this genus adapted to high gamma- or UV ionizing-radiation. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,886,836 bp long genome with its four large plasmids of lengths 97 kbp, 132 kbp, 196 kbp and 315 kbp harbors 2,741 protein-coding and 58 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Details

Language :
English
ISSN :
1944-3277
Volume :
6
Issue :
2
Database :
MEDLINE
Journal :
Standards in genomic sciences
Publication Type :
Academic Journal
Accession number :
22768367
Full Text :
https://doi.org/10.4056/sigs.2756060