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Nocardioides perillae sp. nov., isolated from surface-sterilized roots of Perilla frutescens.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2013 Mar; Vol. 63 (Pt 3), pp. 1068-1072. Date of Electronic Publication: 2012 Jun 15. - Publication Year :
- 2013
-
Abstract
- A Gram-stain-positive, rod-shaped actinobacterium, designated strain I10A-01402(T), was isolated from surface-sterilized roots of a medicinal plant, Perilla frutescens, collected in a suburb of Beijing, China. Chemotaxonomically, the strain contained ll-diaminopimelic acid as the diagnostic diamino acid and MK-8(H4) as the predominant menaquinone. The phospholipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol. The major fatty acids were C17 : 1ω9c, C18 : 1ω9c, C17 : 0, C16 : 0 and iso-C16 : 0. The genomic DNA G+C content was 70.4 mol%. 16S rRNA gene sequence analysis indicated that strain I10A-01402(T) belonged to the genus Nocardioides. Phylogenetic analyses based on 16S rRNA gene sequences showed that the isolate formed a robust cluster with Nocardioides ginsengisegetis Gsoil 485(T), N. koreensis MSL-09(T) and N. alkalitolerans KSL-1(T). On the basis of the evidence from our polyphasic taxonomic study, a novel species, Nocardioides perillae sp. nov., is proposed. The type strain is I10A-01402(T) ( = CPCC 203382(T) = DSM 24552(T) = KCTC 29022(T)).
- Subjects :
- Actinomycetales genetics
Actinomycetales isolation & purification
Bacterial Typing Techniques
Base Composition
China
DNA, Bacterial genetics
Diaminopimelic Acid analysis
Fatty Acids analysis
Molecular Sequence Data
Phospholipids analysis
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Soil Microbiology
Vitamin K 2 analogs & derivatives
Vitamin K 2 analysis
Actinomycetales classification
Perilla frutescens microbiology
Phylogeny
Plant Roots microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 63
- Issue :
- Pt 3
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 22707530
- Full Text :
- https://doi.org/10.1099/ijs.0.044982-0