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EgRBP42 encoding an hnRNP-like RNA-binding protein from Elaeis guineensis Jacq. is responsive to abiotic stresses.
- Source :
-
Plant cell reports [Plant Cell Rep] 2012 Oct; Vol. 31 (10), pp. 1829-43. Date of Electronic Publication: 2012 Jun 15. - Publication Year :
- 2012
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Abstract
- RNA-binding proteins (RBPs) have been implicated as regulatory proteins involved in the post-transcriptional processes of gene expression in plants under various stress conditions. In this study, we report the cloning and characterization of a gene, designated as EgRBP42, encoding a member of the plant heterogeneous nuclear ribonucleoprotein (hnRNP)-like RBP family from oil palm (Elaeis guineensis Jacq.). EgRBP42 consists of two N-terminal RNA recognition motifs and a glycine-rich domain at the C-terminus. The upstream region of EgRBP42 has multiple light-responsive, stress-responsive regulatory elements and regulatory elements associated with flower development. Real-time RT-PCR analysis of EgRBP42 showed that EgRBP42 was expressed in oil palm tissues tested, including leaf, shoot apical meristem, root, female inflorescence, male inflorescence and mesocarp with the lowest transcript level in the roots. EgRBP42 protein interacted with transcripts associated with transcription, translation and stress responses using pull-down assay and electrophoretic mobility shift assay. The accumulation of EgRBP42 and its interacting transcripts were induced by abiotic stresses, including salinity, drought, submergence, cold and heat stresses in leaf discs. Collectively, the data suggested that EgRBP42 is a RBP, which responds to various abiotic stresses and could be advantageous for oil palm under stress conditions. Key message EgRBP42 may be involved in the post-transcriptional regulation of stress-related genes important for plant stress response and adaptation.
- Subjects :
- Amino Acid Motifs
Arecaceae physiology
Base Sequence
Cloning, Molecular
Cold Temperature
Droughts
Electrophoretic Mobility Shift Assay
Escherichia coli genetics
Escherichia coli metabolism
Gene Expression Regulation, Plant
Genes, Plant
Glycine metabolism
Heterogeneous-Nuclear Ribonucleoproteins genetics
Hot Temperature
Molecular Sequence Data
Phylogeny
Plant Components, Aerial genetics
Plant Components, Aerial metabolism
Plant Proteins genetics
Plant Roots genetics
Plant Roots metabolism
Protein Interaction Mapping
RNA, Messenger genetics
RNA, Messenger metabolism
RNA-Binding Proteins genetics
Recombinant Proteins genetics
Recombinant Proteins isolation & purification
Recombinant Proteins metabolism
Transcriptome
Arecaceae genetics
Heterogeneous-Nuclear Ribonucleoproteins metabolism
Plant Proteins metabolism
RNA-Binding Proteins metabolism
Stress, Physiological
Subjects
Details
- Language :
- English
- ISSN :
- 1432-203X
- Volume :
- 31
- Issue :
- 10
- Database :
- MEDLINE
- Journal :
- Plant cell reports
- Publication Type :
- Academic Journal
- Accession number :
- 22699852
- Full Text :
- https://doi.org/10.1007/s00299-012-1297-x