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Multicomponent venom of the spider Cupiennius salei: a bioanalytical investigation applying different strategies.
- Source :
-
The FEBS journal [FEBS J] 2012 Aug; Vol. 279 (15), pp. 2683-94. Date of Electronic Publication: 2012 Jun 18. - Publication Year :
- 2012
-
Abstract
- The multicomponent venom of the spider Cupiennius salei was separated by three different chromatographic strategies to facilitate subsequent analysis of peptidic venom components by tandem mass spectrometry (MALDI-TOF-MS and ESI-MS), Edman degradation and amino acid analysis: (a) desalting of the crude venom by RP-HPLC only, (b) chromatographic separation of the crude venom into 42 fractions by RP-HPLC, and (c) multidimensional purification of the crude venom by size exclusion and cation exchange chromatography and RP-HPLC. A total of 286 components were identified in the venom of C. salei by mass spectrometry and the sequence of 49 new peptides was determined de novo by Edman degradation and tandem mass spectrometry; 30 were C-terminally amidated. The novel peptides were assigned to two main groups: (a) short cationic peptides and (b) Cys-containing peptides with the inhibitor cystine knot motif. Bioinformatics revealed a limited number of substantial similarities, namely with the peptides CpTx1 from the spider Cheiracantium punctorium and U3-ctenitoxin-Asp1a from the South American fishing spider (Ancylometes sp.) and with sequences from a Lycosa singoriensis venom gland transcriptome analysis. The results clearly indicate that the quality of the data is strongly dependent on the chosen separation strategy. The combination of orthogonal analytical methods efficiently excludes alkali ion and matrix adducts, provides indispensable information for an unambiguous identification of isomasses, and results in the most comprehensive repertoire of peptides identified in the venom of C. salei so far.<br /> (© 2012 The Authors Journal compilation © 2012 FEBS.)
- Subjects :
- Amino Acid Sequence
Animals
Chromatography, High Pressure Liquid
Chromatography, Ion Exchange
Computational Biology
Molecular Sequence Data
Peptides chemistry
Peptides genetics
Peptides isolation & purification
Sequence Alignment
Sequence Homology, Amino Acid
Spectrometry, Mass, Electrospray Ionization
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Spider Venoms genetics
Spider Venoms isolation & purification
Spiders chemistry
Spiders genetics
Tandem Mass Spectrometry
Spider Venoms chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1742-4658
- Volume :
- 279
- Issue :
- 15
- Database :
- MEDLINE
- Journal :
- The FEBS journal
- Publication Type :
- Academic Journal
- Accession number :
- 22672445
- Full Text :
- https://doi.org/10.1111/j.1742-4658.2012.08650.x