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Discovering best candidates for Hepatocellular Carcinoma (HCC) by in-silico techniques and tools.
- Source :
-
International journal of bioinformatics research and applications [Int J Bioinform Res Appl] 2012; Vol. 8 (1-2), pp. 141-52. - Publication Year :
- 2012
-
Abstract
- Protein-ligand interaction plays an important role in structural-based drug designing. The aim of this work is to select new possible candidates for HCC by in-silico drug design using bioinformatics techniques and tool. Essential proteins were targeted for HCC metastasis; drugs were designed for them by using ligand-based drug design based on active model drugs. The study considered BCL-XL and FGF proteins and the commercially available drugs against HCC. The receptor was docked to those drugs and the energy values were obtained using the Molecular Operating Environment (MOE) docking software. According to the obtained energy values, we have chosen the best drugs. Also, the aim was to improve the binding efficiency and steric compatibility of the obtained drug by improving the Absorption Distribution Metabolism Excretion Toxicity (ADMET) properties of the analogues using available in-silico ADMET tools. The results of molecular docking identified 10 candidates for FGF and 17 candidates for BCL-XL. After the ADMET studies, these candidates are reduced to only 2 best candidates for FGF and 1 best candidate for BCL-XL.
- Subjects :
- Algorithms
Carcinoma, Hepatocellular metabolism
Computational Biology
Databases, Factual
Humans
Ligands
Liver Neoplasms metabolism
Receptors, Fibroblast Growth Factor chemistry
Receptors, Fibroblast Growth Factor metabolism
bcl-X Protein chemistry
bcl-X Protein metabolism
Antineoplastic Agents chemistry
Carcinoma, Hepatocellular drug therapy
Drug Design
Liver Neoplasms drug therapy
Models, Molecular
Receptors, Fibroblast Growth Factor antagonists & inhibitors
bcl-X Protein antagonists & inhibitors
Subjects
Details
- Language :
- English
- ISSN :
- 1744-5485
- Volume :
- 8
- Issue :
- 1-2
- Database :
- MEDLINE
- Journal :
- International journal of bioinformatics research and applications
- Publication Type :
- Academic Journal
- Accession number :
- 22450276
- Full Text :
- https://doi.org/10.1504/IJBRA.2012.045956