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Actin filament tracking in electron tomograms of negatively stained lamellipodia using the localized radon transform.

Authors :
Winkler C
Vinzenz M
Small JV
Schmeiser C
Source :
Journal of structural biology [J Struct Biol] 2012 Apr; Vol. 178 (1), pp. 19-28. Date of Electronic Publication: 2012 Mar 01.
Publication Year :
2012

Abstract

The aim of this work was to develop a protocol for automated tracking of actin filaments in electron tomograms of lamellipodia embedded in negative stain. We show that a localized version of the Radon transform for the detection of filament directions enables three-dimensional visualizations of filament network architecture, facilitating extraction of statistical information including orientation profiles. We discuss the requirements for parameter selection set by the raw image data in the context of other, similar tracking protocols.<br /> (Copyright © 2012 Elsevier Inc. All rights reserved.)

Details

Language :
English
ISSN :
1095-8657
Volume :
178
Issue :
1
Database :
MEDLINE
Journal :
Journal of structural biology
Publication Type :
Academic Journal
Accession number :
22387240
Full Text :
https://doi.org/10.1016/j.jsb.2012.02.011