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Functional characterisation of bovine interleukin 8 promoter haplotypes in vitro.
- Source :
-
Molecular immunology [Mol Immunol] 2012 Feb; Vol. 50 (1-2), pp. 108-16. Date of Electronic Publication: 2012 Jan 12. - Publication Year :
- 2012
-
Abstract
- Interleukin 8 (IL-8) is a major mediator of the innate immune response and polymorphisms in this gene are associated with susceptibility to inflammatory disease in humans. The aim of this study was to characterise the promoter region of the bovine IL8 gene towards understanding its regulation and the effect of promoter polymorphisms on gene expression levels. Twenty-nine polymorphic sites were identified across a 2.1kb upstream promoter region of the IL8 gene including two insertion/deletion polymorphisms. Sequence analysis and SNP genotyping identified two distinct promoter haplotypes (IL8-h1 and IL8-h2), which were present at significantly different frequencies in two divergently selected cattle breeds - Holstein-Friesian and Norwegian Red (IL8-h1 at 48% and 80% respectively). IL8-h1 was functionally less responsive in unstimulated mammary epithelial cells and in response to stimulation with LPS or bovine TNF. Serial deletion analysis and in silico transcription-factor binding site analysis indicated that allele specific binding of the transcriptional repressor Oct-1 may account for the reduced sensitivity of IL8-h1. Our finding of genetic variation in the bovine IL8 promoter that differentially regulates its expression has significant functional implications for IL8 expression in vitro and which may impact on susceptibility to bovine infectious disease and inflammation.<br /> (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Subjects :
- Alleles
Animals
Base Sequence
Binding Sites genetics
Cattle classification
Cell Line
Epithelial Cells drug effects
Epithelial Cells metabolism
Gene Expression drug effects
Gene Frequency
Genetic Variation
Genotype
Lipopolysaccharides pharmacology
Luciferases genetics
Luciferases metabolism
Molecular Sequence Data
Octamer Transcription Factor-1 metabolism
Polymorphism, Single Nucleotide
Regulatory Sequences, Nucleic Acid genetics
Reverse Transcriptase Polymerase Chain Reaction
Sequence Analysis, DNA
Species Specificity
Tumor Necrosis Factor-alpha pharmacology
Cattle genetics
Haplotypes
Interleukin-8 genetics
Promoter Regions, Genetic genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1872-9142
- Volume :
- 50
- Issue :
- 1-2
- Database :
- MEDLINE
- Journal :
- Molecular immunology
- Publication Type :
- Academic Journal
- Accession number :
- 22244152
- Full Text :
- https://doi.org/10.1016/j.molimm.2011.12.011