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Classical swine fever virus detection: results of a real-time reverse transcription polymerase chain reaction ring trial conducted in the framework of the European network of excellence for epizootic disease diagnosis and control.
- Source :
-
Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc [J Vet Diagn Invest] 2011 Sep; Vol. 23 (5), pp. 999-1004. - Publication Year :
- 2011
-
Abstract
- The current study reports on a real-time reverse transcription polymerase chain reaction (real-time RT-PCR) ring trial for the detection of Classical swine fever virus (CSFV) genomic RNA undertaken by 10 European laboratories. All laboratories were asked to use their routine in-house real-time RT-PCR protocols and a standardized protocol commonly used by the Friedrich-Loeffler-Institute (FLI) on a panel of well-characterized samples. In general, all participants produced results within the acceptable range. The FLI assay, several in-house assays, and the commercial kits had high analytical sensitivity and specificity values. Nevertheless, some in-house systems had unspecific reactions or suboptimal sensitivity with only a single CSFV genotype. Follow-up actions involved either improvement of suboptimal assays or replacement of specific laboratory assays with the FLI protocol, with or without modifications. In conclusion, the ring trial showed reliability of classical swine fever diagnosis on an international level and helped to optimize CSFV-specific RT-PCR diagnostics.
- Subjects :
- Animals
Classical Swine Fever epidemiology
Classical Swine Fever Virus genetics
Europe
Genotype
Observer Variation
RNA, Viral isolation & purification
Real-Time Polymerase Chain Reaction methods
Reverse Transcriptase Polymerase Chain Reaction methods
Sensitivity and Specificity
Swine
Classical Swine Fever diagnosis
Classical Swine Fever Virus isolation & purification
Laboratories
Real-Time Polymerase Chain Reaction veterinary
Reverse Transcriptase Polymerase Chain Reaction veterinary
Subjects
Details
- Language :
- English
- ISSN :
- 1943-4936
- Volume :
- 23
- Issue :
- 5
- Database :
- MEDLINE
- Journal :
- Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc
- Publication Type :
- Academic Journal
- Accession number :
- 21908363
- Full Text :
- https://doi.org/10.1177/1040638711416849