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[Genetic characterization of poliovirus isolates from environmental sewage surveillance in Shandong, 2010].
- Source :
-
Bing du xue bao = Chinese journal of virology [Bing Du Xue Bao] 2011 Jul; Vol. 27 (4), pp. 337-41. - Publication Year :
- 2011
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Abstract
- To investigate the genetic characteristics of poliovirus isolates from environmental sewage surveillance in Shandong province, we collected sewage samples in Jinan and Linyi City. Serotyping and VP1/ 3D sequencing were performed on polioviruses isolated from the concentrated sewage samples, and VP1 mutation and recombination were analyzed. Thirty-two of sewage samples were collected, and polioviruses were detected in 10 of the samples with a positive rate of 31.3%. Eighteen Sabin strains were isolated including three type 1, nine type 2, and six type 3 polioviruses, and the number of nucleotide substitutions in VP1 coding region varied from 0 to 4. Recombination was found in three Sabin 2 and four Sabin 3 polioviruses. Analysis of neurovirulence sites of VP1 revealed that one Sabin 1 vaccine strain had a nucleotide change of A to G at nt 2749, one Sabin 2 strain had a nucleotide change of A to G at nt 2908, three Sabin 2 strains had a nucleotide change of U to C at nt 2909, and all six Sabin 3 strains had a nucleotide change of C to U at nt 2493. Poliovirus vaccine strains could be isolated from environmental sewage with a high rate of gene recombination and back mutation of neuvirulence-associated sites. None of wild-type poliovirus or vaccine-derived poliovirus was detected.
Details
- Language :
- Chinese
- ISSN :
- 1000-8721
- Volume :
- 27
- Issue :
- 4
- Database :
- MEDLINE
- Journal :
- Bing du xue bao = Chinese journal of virology
- Publication Type :
- Academic Journal
- Accession number :
- 21874902