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Expressed sequence tags from heat-shocked seagrass Zostera noltii (Hornemann) from its southern distribution range.

Authors :
Massa SI
Pearson GA
Aires T
Kube M
Olsen JL
Reinhardt R
Serrão EA
Arnaud-Haond S
Source :
Marine genomics [Mar Genomics] 2011 Sep; Vol. 4 (3), pp. 181-8. Date of Electronic Publication: 2011 Jun 14.
Publication Year :
2011

Abstract

Predicted global climate change threatens the distributional ranges of species worldwide. We identified genes expressed in the intertidal seagrass Zostera noltii during recovery from a simulated low tide heat-shock exposure. Five Expressed Sequence Tag (EST) libraries were compared, corresponding to four recovery times following sub-lethal temperature stress, and a non-stressed control. We sequenced and analyzed 7009 sequence reads from 30min, 2h, 4h and 24h after the beginning of the heat-shock (AHS), and 1585 from the control library, for a total of 8594 sequence reads. Among 51 Tentative UniGenes (TUGs) exhibiting significantly different expression between libraries, 19 (37.3%) were identified as 'molecular chaperones' and were over-expressed following heat-shock, while 12 (23.5%) were 'photosynthesis TUGs' generally under-expressed in heat-shocked plants. A time course analysis of expression showed a rapid increase in expression of the molecular chaperone class, most of which were heat-shock proteins; which increased from 2 sequence reads in the control library to almost 230 in the 30min AHS library, followed by a slow decrease during further recovery. In contrast, 'photosynthesis TUGs' were under-expressed 30min AHS compared with the control library, and declined progressively with recovery time in the stress libraries, with a total of 29 sequence reads 24h AHS, compared with 125 in the control. A total of 4734 TUGs were screened for EST-Single Sequence Repeats (EST-SSRs) and 86 microsatellites were identified.<br /> (Copyright © 2011 Elsevier B.V. All rights reserved.)

Details

Language :
English
ISSN :
1876-7478
Volume :
4
Issue :
3
Database :
MEDLINE
Journal :
Marine genomics
Publication Type :
Academic Journal
Accession number :
21867970
Full Text :
https://doi.org/10.1016/j.margen.2011.04.003