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Bioinformatic and molecular characterization of beta-defensins-like peptides isolated from the green lizard Anolis carolinensis.
- Source :
-
Developmental and comparative immunology [Dev Comp Immunol] 2012 Jan; Vol. 36 (1), pp. 222-9. Date of Electronic Publication: 2011 May 31. - Publication Year :
- 2012
-
Abstract
- The high resistance of lizards to infections indicates that anti-microbial peptides may be involved. Through the analysis of the green lizard (Anolis carolinensis) genome and the expressed sequence tag (EST) libraries 32 beta-defensin-like-peptides have been identified. The level of expression of some of these genes in different tissues has been determined by semi-quantitative RT-PCR. Gene expression and structure analysis suggest the presence of alternative splicing mechanisms, with a number of exons ranging from two to four, similar to that for beta-defensins genes in mammals. Lizard beta-defensin-like peptides present the characteristic cysteine-motif identified in mammalian and avian beta-defensins. Phylogenetic analysis indicates that some lizard beta-defensins-like peptides are related to crotamine and crotamin-like peptides of snakes and lizards suggesting that beta-defensins and venomous peptides have a common ancestor gene.<br /> (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Subjects :
- Alternative Splicing
Amino Acid Motifs genetics
Amino Acid Sequence
Animals
Cloning, Molecular
Computational Biology
Exons genetics
Expressed Sequence Tags
Genome
Immunity, Innate
Molecular Sequence Data
Phylogeny
Sequence Alignment
Sequence Homology, Amino Acid
Snakes
beta-Defensins immunology
beta-Defensins metabolism
Crotalid Venoms genetics
Lizards
beta-Defensins genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1879-0089
- Volume :
- 36
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Developmental and comparative immunology
- Publication Type :
- Academic Journal
- Accession number :
- 21663758
- Full Text :
- https://doi.org/10.1016/j.dci.2011.05.004