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Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation.

Authors :
Miller MD
Aravind L
Bakolitsa C
Rife CL
Carlton D
Abdubek P
Astakhova T
Axelrod HL
Chiu HJ
Clayton T
Deller MC
Duan L
Feuerhelm J
Grant JC
Han GW
Jaroszewski L
Jin KK
Klock HE
Knuth MW
Kozbial P
Krishna SS
Kumar A
Marciano D
McMullan D
Morse AT
Nigoghossian E
Okach L
Reyes R
van den Bedem H
Weekes D
Xu Q
Hodgson KO
Wooley J
Elsliger MA
Deacon AM
Godzik A
Lesley SA
Wilson IA
Source :
Acta crystallographica. Section F, Structural biology and crystallization communications [Acta Crystallogr Sect F Struct Biol Cryst Commun] 2010 Oct 01; Vol. 66 (Pt 10), pp. 1167-73. Date of Electronic Publication: 2010 Jul 06.
Publication Year :
2010

Abstract

The crystal structure of Dhaf4260 from Desulfitobacterium hafniense DCB-2 was determined by single-wavelength anomalous diffraction (SAD) to a resolution of 2.01 Å using the semi-automated high-throughput pipeline of the Joint Center for Structural Genomics (JCSG) as part of the NIGMS Protein Structure Initiative (PSI). This protein structure is the first representative of the PF04016 (DUF364) Pfam family and reveals a novel combination of two well known domains (an enolase N-terminal-like fold followed by a Rossmann-like domain). Structural and bioinformatic analyses reveal partial similarities to Rossmann-like methyltransferases, with residues from the enolase-like fold combining to form a unique active site that is likely to be involved in the condensation or hydrolysis of molecules implicated in the synthesis of flavins, pterins or other siderophores. The genome context of Dhaf4260 and homologs additionally supports a role in heavy-metal chelation.

Details

Language :
English
ISSN :
1744-3091
Volume :
66
Issue :
Pt 10
Database :
MEDLINE
Journal :
Acta crystallographica. Section F, Structural biology and crystallization communications
Publication Type :
Academic Journal
Accession number :
20944207
Full Text :
https://doi.org/10.1107/S1744309110007517