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[Construction of a methylation filtration library in Hevea brasiliensis.].
- Source :
-
Yi chuan = Hereditas [Yi Chuan] 2010 Oct; Vol. 32 (10), pp. 1071-6. - Publication Year :
- 2010
-
Abstract
- In order to enrich gene encoding region of Hevea brasiliensis, a methylation filtration library was constructed using Escherichia coli McrBC restriction-modification system. The titers of the non-amplified library and the amplified library were 2.6×106 pfu/ml and 9.0×109, respectively. The rate of positive clones was 86.4%. The lengths of inserted DNA sequence ranged from 1 kb to 2.5 kb and the average size of inserts was 1.2 kb. One hundred clones were selected randomly for sequencing, resulting in splicing out of 81 non-redundant sequences, including 6 contigs and 75 singlets. The redundancy was 17.35%. Blast analysis showed that 39.5% of non-redundant sequences were homologous with the Nr database, 14.81% with the EST database, and 32.1% were unknown sequences. Some sequences were related genes for flowering, insect and disease resistance. Therefore, the rubber tree methylation library is helpful for discovery and cloning of functional genes.
Details
- Language :
- Chinese
- ISSN :
- 0253-9772
- Volume :
- 32
- Issue :
- 10
- Database :
- MEDLINE
- Journal :
- Yi chuan = Hereditas
- Publication Type :
- Academic Journal
- Accession number :
- 20943496
- Full Text :
- https://doi.org/10.3724/sp.j.1005.2010.01071