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Draft genome sequence of the oilseed species Ricinus communis.

Authors :
Chan AP
Crabtree J
Zhao Q
Lorenzi H
Orvis J
Puiu D
Melake-Berhan A
Jones KM
Redman J
Chen G
Cahoon EB
Gedil M
Stanke M
Haas BJ
Wortman JR
Fraser-Liggett CM
Ravel J
Rabinowicz PD
Source :
Nature biotechnology [Nat Biotechnol] 2010 Sep; Vol. 28 (9), pp. 951-6. Date of Electronic Publication: 2010 Aug 22.
Publication Year :
2010

Abstract

Castor bean (Ricinus communis) is an oilseed crop that belongs to the spurge (Euphorbiaceae) family, which comprises approximately 6,300 species that include cassava (Manihot esculenta), rubber tree (Hevea brasiliensis) and physic nut (Jatropha curcas). It is primarily of economic interest as a source of castor oil, used for the production of high-quality lubricants because of its high proportion of the unusual fatty acid ricinoleic acid. However, castor bean genomics is also relevant to biosecurity as the seeds contain high levels of ricin, a highly toxic, ribosome-inactivating protein. Here we report the draft genome sequence of castor bean (4.6-fold coverage), the first for a member of the Euphorbiaceae. Whereas most of the key genes involved in oil synthesis and turnover are single copy, the number of members of the ricin gene family is larger than previously thought. Comparative genomics analysis suggests the presence of an ancient hexaploidization event that is conserved across the dicotyledonous lineage.

Details

Language :
English
ISSN :
1546-1696
Volume :
28
Issue :
9
Database :
MEDLINE
Journal :
Nature biotechnology
Publication Type :
Academic Journal
Accession number :
20729833
Full Text :
https://doi.org/10.1038/nbt.1674