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Genetic identification of Southern Ocean octopod samples using mtCOI.
- Source :
-
Comptes rendus biologies [C R Biol] 2010 May; Vol. 333 (5), pp. 395-404. Date of Electronic Publication: 2010 Mar 16. - Publication Year :
- 2010
-
Abstract
- East Antarctic octopods were identified by sequencing mtCOI and using four analytical approaches: Neighbor-joining by Kimura-2-Parameter-based distances, character-based, BLAST, and Bayesian Inference of Phylogeny. Although the distance-based analytical approaches identified a high proportion of the sequences (99.5% to genus and 88.1% to species level), these results are undermined by the absence of a clear gap between intra- and interspecific variation. The character-based approach gave highly conflicting results compared to the distance-based methods and failed to identify apomorphic characters for many of the species. While a DNA independent approach is necessary for validation of the method comparisons, crude morphological observations give early support to the distance-based results and indicate extensive range expansions of several species compared to previous studies. Furthermore, the use of distance-based phylogenetic methods nevertheless group specimens into plausible species clades that are highly useful in non-taxonomical or non-systematic studies.<br /> (Copyright 2010 Académie des sciences. Published by Elsevier SAS. All rights reserved.)
Details
- Language :
- English
- ISSN :
- 1768-3238
- Volume :
- 333
- Issue :
- 5
- Database :
- MEDLINE
- Journal :
- Comptes rendus biologies
- Publication Type :
- Academic Journal
- Accession number :
- 20451881
- Full Text :
- https://doi.org/10.1016/j.crvi.2010.02.002