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Bacillus siamensis sp. nov., isolated from salted crab (poo-khem) in Thailand.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2010 Oct; Vol. 60 (Pt 10), pp. 2364-2370. Date of Electronic Publication: 2009 Nov 20. - Publication Year :
- 2010
-
Abstract
- A Gram-positive, endospore-forming, rod-shaped bacterium, strain PD-A10(T), was isolated from salted crab (poo-khem) in Thailand and subjected to a taxonomic study. Phenotypic and chemotaxonomic characteristics, including phylogenetic analyses, showed that the novel strain was a member of the genus Bacillus. The novel strain grew in medium with 0-14 % (w/v) NaCl, at 4-55°C and at pH4.5-9. The predominant quinone was a menaquinone with seven isoprene units (MK-7). The major fatty acids were anteiso-C₁₅:₀ and anteiso-C₁₇:₀. Polar lipid analysis revealed the presence of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, lysylphosphatidylglycerol, glycolipid and unknown lipids. The DNA G+C content was 41.4 mol%. The 16S rRNA gene sequence similarities between strain PD-A10(T) and Bacillus amyloliquefaciens NBRC 15535(T), Bacillus subtilis DSM 10(T), Bacillus vallismortis DSM 11031(T) and Bacillus mojavensis IFO 15718(T) were 99.5, 99.4, 99.4 and 99.2 %, respectively. Strain PD-A10(T) showed a low degree similarity of rep-PCR fingerprints and low DNA-DNA relatedness with the above-mentioned species. On the basis of the data gathered in this study, strain PD-A10(T) should be classified as representing a novel species of the genus Bacillus, for which the name Bacillus siamensis sp. nov. is proposed. The type strain is PD-A10(T) (=BCC 22614(T)=KCTC 13613(T)).
- Subjects :
- Bacillus chemistry
Bacillus genetics
Bacterial Typing Techniques
Base Composition
Cluster Analysis
DNA Fingerprinting
DNA, Bacterial chemistry
DNA, Bacterial genetics
DNA, Ribosomal chemistry
DNA, Ribosomal genetics
Fatty Acids analysis
Hydrogen-Ion Concentration
Molecular Sequence Data
Nucleic Acid Hybridization
Phospholipids analysis
Phylogeny
Quinones analysis
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Sodium Chloride metabolism
Spores, Bacterial cytology
Temperature
Thailand
Bacillus classification
Bacillus isolation & purification
Food Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 60
- Issue :
- Pt 10
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 19933584
- Full Text :
- https://doi.org/10.1099/ijs.0.018879-0