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GATA3 is a master regulator of the transcriptional response to low-dose ionizing radiation in human keratinocytes.
- Source :
-
BMC genomics [BMC Genomics] 2009 Sep 07; Vol. 10, pp. 417. Date of Electronic Publication: 2009 Sep 07. - Publication Year :
- 2009
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Abstract
- Background: The general population is constantly exposed to low levels of radiation through natural, occupational or medical irradiation. Even if the biological effects of low-level radiation have been intensely debated and investigated, the molecular mechanisms underlying the cellular response to low doses remain largely unknown.<br />Results: The present study investigated the role of GATA3 protein in the control of the cellular and molecular response of human keratinocytes exposed to a 1 cGy dose of X-rays. Chromatin immunoprecipitation showed GATA3 to be able to bind the promoter of 4 genes responding to a 1 cGy exposure. To go further into the role of GATA3 after ionizing radiation exposure, we studied the cellular and molecular consequences of radiation in GATA3 knock-down cells. Knock-down was obtained by lentiviral-mediated expression of an shRNA targeting the GATA3 transcript in differentiated keratinocytes. First, radiosensitivity was assessed: the toxicity, in terms of immediate survival (with XTT test), associated with 1 cGy radiation was found to be increased in GATA3 knock-down cells. The impact of GATA3 knock-down on the transcriptome of X-ray irradiated cells was also investigated, using oligonucleotide microarrays to assess changes between 3 h and 72 h post-irradiation in normal vs GATA3 knock-down backgrounds; transcriptome response was found to be completely altered in GATA3 knock-down cells, with a strong induction/repression peak 48 h after irradiation. Functional annotation revealed enrichment in genes known to be involved in chaperone activity, TGFbeta signalling and stress response.<br />Conclusion: Taken together, these data indicate that GATA3 is an important regulator of the cellular and molecular response of epidermal cells to very low doses of radiation.
- Subjects :
- Cells, Cultured
Chromatin Immunoprecipitation
Gene Expression Regulation
Gene Knockdown Techniques
Humans
Keratinocytes metabolism
Oligonucleotide Array Sequence Analysis
Protein Binding
Radiation Tolerance genetics
Radiation, Ionizing
Transduction, Genetic
GATA3 Transcription Factor metabolism
Gene Expression Profiling
Keratinocytes radiation effects
Promoter Regions, Genetic
Subjects
Details
- Language :
- English
- ISSN :
- 1471-2164
- Volume :
- 10
- Database :
- MEDLINE
- Journal :
- BMC genomics
- Publication Type :
- Academic Journal
- Accession number :
- 19735555
- Full Text :
- https://doi.org/10.1186/1471-2164-10-417