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Rudaea cellulosilytica gen. nov., sp. nov., isolated from soil.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2009 Sep; Vol. 59 (Pt 9), pp. 2308-12. Date of Electronic Publication: 2009 Jul 20. - Publication Year :
- 2009
-
Abstract
- A yellow-pigmented, Gram-negative, aerobic, rod-shaped bacterium, strain KIS3-4T, was isolated from soil collected on Daechung Island in the West Sea of Korea. Phylogenetic analysis based on the 16S rRNA gene sequence placed strain KIS3-4T in a distinct lineage in the family Xanthomonadaceae. Strain KIS3-4T shared 87.3-93.7% sequence similarity with members of the family Xanthomonadaceae, and was related most closely to the genera Dyella and Dokdonella. In its biochemical characteristics, strain KIS3-4T was clearly separable from other genera within the family Xanthomonadaceae on the basis of the hydrolysis of cellulose and urea, high G+C content (64 mol%) and fatty acid profile. Major fatty acids (>10% of the total fatty acids) were iso-C17:1omega9c (32.8%), iso-C17:0 (18.0%) and iso-C16:0 (12.7%). Q-8 was the predominant respiratory quinone. Phosphatidylethanolamine and several unidentified aminophospholipids and phospholipids were present. Based on its unique phenotypic, genotypic and phylogenetic features, strain KIS3-4T represents a novel genus and species, for which the name Rudaea cellulosilytica gen. nov., sp. nov. is proposed. The type strain of Rudaea cellulosilytica is KIS3-4T (=KACC 12734T=JCM 15422T).
- Subjects :
- Aerobiosis
Bacterial Typing Techniques
Base Composition
Cellulose metabolism
Cluster Analysis
DNA, Bacterial chemistry
DNA, Bacterial genetics
DNA, Ribosomal chemistry
DNA, Ribosomal genetics
Fatty Acids analysis
Korea
Molecular Sequence Data
Phospholipids analysis
Phylogeny
Preservation, Biological
Quinones analysis
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Urea metabolism
Xanthomonadaceae genetics
Xanthomonadaceae physiology
Soil Microbiology
Xanthomonadaceae classification
Xanthomonadaceae isolation & purification
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5026
- Volume :
- 59
- Issue :
- Pt 9
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 19620378
- Full Text :
- https://doi.org/10.1099/ijs.0.005165-0