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Selection, characterization and application of new RNA HIV gp 120 aptamers for facile delivery of Dicer substrate siRNAs into HIV infected cells.
- Source :
-
Nucleic acids research [Nucleic Acids Res] 2009 May; Vol. 37 (9), pp. 3094-109. Date of Electronic Publication: 2009 Mar 21. - Publication Year :
- 2009
-
Abstract
- The envelope glycoprotein of human immunodeficiency virus (HIV) consists of an exterior glycoprotein (gp120) and a trans-membrane domain (gp41) and has an important role in viral entry into cells. HIV-1 entry has been validated as a clinically relevant anti-viral strategy for drug discovery. In the present work, several 2'-F substituted RNA aptamers that bind to the HIV-1(BaL) gp120 protein with nanomole affinity were isolated from a RNA library by the SELEX (Systematic Evolution of Ligands by EXponential enrichment) procedure. From two of these aptamers we created a series of new dual inhibitory function anti-gp120 aptamer-siRNA chimeras. The aptamers and aptamer-siRNA chimeras specifically bind to and are internalized into cells expressing HIV gp160. The Dicer-substrate siRNA delivered by the aptamers is functionally processed by Dicer, resulting in specific inhibition of HIV-1 replication and infectivity in cultured CEM T-cells and primary blood mononuclear cells (PBMCs). Moreover, we have introduced a 'sticky' sequence onto a chemically synthesized aptamer which facilitates attachment of the Dicer substrate siRNAs for potential multiplexing. Our results provide a set of novel inhibitory agents for blocking HIV replication and further validate the use of aptamers for delivery of Dicer substrate siRNAs.
- Subjects :
- Animals
Anti-HIV Agents metabolism
Aptamers, Nucleotide metabolism
Base Sequence
Cells, Cultured
HIV Envelope Protein gp120 genetics
HIV Envelope Protein gp160 metabolism
HIV-1 genetics
HIV-1 metabolism
Humans
Interferon Type I biosynthesis
Molecular Sequence Data
RNA, Small Interfering metabolism
Ribonuclease III metabolism
SELEX Aptamer Technique
T-Lymphocytes immunology
Anti-HIV Agents chemistry
Aptamers, Nucleotide chemistry
HIV Envelope Protein gp120 antagonists & inhibitors
HIV-1 physiology
RNA, Small Interfering chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1362-4962
- Volume :
- 37
- Issue :
- 9
- Database :
- MEDLINE
- Journal :
- Nucleic acids research
- Publication Type :
- Academic Journal
- Accession number :
- 19304999
- Full Text :
- https://doi.org/10.1093/nar/gkp185