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Ab initio studies of receptor interactions with AMPA ((S)-2-amino-3-(3-hydroxy-5-methyl-4-isoxazolyl) propionic acid) and kainic acid (2S-(2 alpha, 3 beta, 4 beta))-2-carboxy-4-(1-methylethenyl)-3-pyrrolidineacetic acid.
- Source :
-
Journal of molecular modeling [J Mol Model] 2009 Sep; Vol. 15 (9), pp. 1109-17. Date of Electronic Publication: 2009 Feb 21. - Publication Year :
- 2009
-
Abstract
- The optimum geometries and binding energies of the complexes formed by AMPA and Kainic acid, as well as their anions with tyrosine, proline and some tripeptides are investigated with quantum chemical calculations (HF/6-31G**). It was found that receptors featuring the Tyr-Ala-Pro sequence exhibit stronger binding energies to the substrates than the Tyr-Ser-Pro and Tyr-Ser-Ser. As expected, the anions are more bound than the neutral species. This work can lead to investigations on the effect of AMPA receptors mutations on the brain functions, possibly related to criminal tendencies.
- Subjects :
- Alanine chemistry
Amino Acid Sequence
Animals
Behavior
Brain metabolism
Excitatory Amino Acid Agonists metabolism
Humans
Kainic Acid metabolism
Molecular Sequence Data
Mutation
Proline chemistry
Quantum Theory
Receptors, AMPA genetics
Receptors, AMPA metabolism
Thermodynamics
Tyrosine chemistry
alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid metabolism
Excitatory Amino Acid Agonists chemistry
Kainic Acid chemistry
Receptors, AMPA chemistry
alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 0948-5023
- Volume :
- 15
- Issue :
- 9
- Database :
- MEDLINE
- Journal :
- Journal of molecular modeling
- Publication Type :
- Academic Journal
- Accession number :
- 19234729
- Full Text :
- https://doi.org/10.1007/s00894-009-0460-y