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Deinococcus aquiradiocola sp. nov., isolated from a radioactive site in Japan.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2009 Jan; Vol. 59 (Pt 1), pp. 144-9. - Publication Year :
- 2009
-
Abstract
- A gamma- and UV-radiation-tolerant, pale-pink strain (TDMA-uv53T) was isolated from a freshwater sample collected at Misasa (Tottori, Japan), after exposure of the water sample to UV radiation. The cells stained Gram-positive and were non-motile, rod-shaped and non-spore-forming. The DNA G+C content of the strain was 69.1 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain TDMA-uv53T belongs to the genus Deinococcus, the highest sequence similarities being found with Deinococcus claudionis PO-04-19-125T (96 %), D. altitudinis ME-04-01-32T (96 %), D. radiomollis PO-04-20-132T (95 %), D. deserti VCD115T (91.5 %), D. hopiensis KR-140T (91.0 %) and D. sonorensis KR-87T (91.0 %). Major fatty acids were iso-15 : 0, 15 : 1omega6c, 15 : 0, 16 : 0 and summed feature 3 (iso-15 : 0 2-OH and/or 16 : 1omega7c). MK-8 was the predominant respiratory quinone. Phylogenetic distinctiveness and unique phenotypic characteristics differentiated strain TDMA-uv53T from closely related Deinococcus species. The results of our polyphasic taxonomic analyses suggested that TDMA-uv53T represents a novel Deinococcus species, for which the name Deinococcus aquiradiocola sp. nov. is proposed. The type strain is TDMA-uv53T (=JCM 14371(T) [corrected] =NBRC 102118T =CCUG 53612T).
- Subjects :
- Bacterial Typing Techniques
Base Composition
DNA, Bacterial analysis
DNA, Ribosomal analysis
Deinococcus genetics
Fatty Acids analysis
Genes, rRNA
Japan
Phenotype
Phylogeny
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Species Specificity
Deinococcus classification
Deinococcus isolation & purification
Fresh Water microbiology
Water Pollution, Radioactive
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5026
- Volume :
- 59
- Issue :
- Pt 1
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 19126739
- Full Text :
- https://doi.org/10.1099/ijs.0.65762-0