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AMIN domains have a predicted role in localization of diverse periplasmic protein complexes.

Authors :
de Souza RF
Anantharaman V
de Souza SJ
Aravind L
Gueiros-Filho FJ
Source :
Bioinformatics (Oxford, England) [Bioinformatics] 2008 Nov 01; Vol. 24 (21), pp. 2423-6. Date of Electronic Publication: 2008 Aug 21.
Publication Year :
2008

Abstract

We describe AMIN (Amidase N-terminal domain), a novel protein domain found specifically in bacterial periplasmic proteins. AMIN domains are widely distributed among peptidoglycan hydrolases and transporter protein families. Based on experimental data, contextual information and phyletic profiles, we suggest that AMIN domains mediate the targeting of periplasmic or extracellular proteins to specific regions of the bacterial envelope.

Details

Language :
English
ISSN :
1367-4811
Volume :
24
Issue :
21
Database :
MEDLINE
Journal :
Bioinformatics (Oxford, England)
Publication Type :
Academic Journal
Accession number :
18723522
Full Text :
https://doi.org/10.1093/bioinformatics/btn449