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Hydrogen bond switching among flavin and amino acid side chains in the BLUF photoreceptor observed by ultrafast infrared spectroscopy.
- Source :
-
Biophysical journal [Biophys J] 2008 Nov 15; Vol. 95 (10), pp. 4790-802. Date of Electronic Publication: 2008 Aug 15. - Publication Year :
- 2008
-
Abstract
- BLUF domains constitute a recently discovered class of photoreceptor proteins found in bacteria and eukaryotic algae. BLUF domains are blue-light sensitive through a FAD cofactor that is involved in an extensive hydrogen-bond network with nearby amino acid side chains, including a highly conserved tyrosine and glutamine. The participation of particular amino acid side chains in the ultrafast hydrogen-bond switching reaction with FAD that underlies photoactivation of BLUF domains is assessed by means of ultrafast infrared spectroscopy. Blue-light absorption by FAD results in formation of FAD(*-) and a bleach of the tyrosine ring vibrational mode on a picosecond timescale, showing that electron transfer from tyrosine to FAD constitutes the primary photochemistry. This interpretation is supported by the absence of a kinetic isotope effect on the fluorescence decay on H/D exchange. Subsequent protonation of FAD(*-) to result in FADH(*) on a picosecond timescale is evidenced by the appearance of a N-H bending mode at the FAD N5 protonation site and of a FADH(*) C=N stretch marker mode, with tyrosine as the likely proton donor. FADH(*) is reoxidized in 67 ps (180 ps in D(2)O) to result in a long-lived hydrogen-bond switched network around FAD. This hydrogen-bond switch shows infrared signatures from the C-OH stretch of tyrosine and the FAD C4=O and C=N stretches, which indicate increased hydrogen-bond strength at all these sites. The results support a previously hypothesized rotation of glutamine by approximately 180 degrees through a light-driven radical-pair mechanism as the determinant of the hydrogen-bond switch.
- Subjects :
- Amino Acids radiation effects
Binding Sites
Computer Simulation
Flavins radiation effects
Hydrogen Bonding radiation effects
Light
Photoreceptors, Microbial radiation effects
Protein Binding
Protein Structure, Tertiary radiation effects
Spectrophotometry, Infrared methods
Amino Acids chemistry
Flavins chemistry
Light Signal Transduction
Models, Chemical
Photoreceptors, Microbial chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1542-0086
- Volume :
- 95
- Issue :
- 10
- Database :
- MEDLINE
- Journal :
- Biophysical journal
- Publication Type :
- Academic Journal
- Accession number :
- 18708458
- Full Text :
- https://doi.org/10.1529/biophysj.108.139246