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Simulation studies of self-organization of microtubules and molecular motors.

Authors :
Jia Z
Karpeev D
Aranson IS
Bates PW
Source :
Physical review. E, Statistical, nonlinear, and soft matter physics [Phys Rev E Stat Nonlin Soft Matter Phys] 2008 May; Vol. 77 (5 Pt 1), pp. 051905. Date of Electronic Publication: 2008 May 08.
Publication Year :
2008

Abstract

We perform Monte Carlo type simulation studies of self-organization of microtubules interacting with molecular motors. We model microtubules as stiff polar rods of equal length exhibiting anisotropic diffusion in the plane. The molecular motors are implicitly introduced by specifying certain probabilistic collision rules resulting in realignment of the rods. This approximation of the complicated microtubule-motor interaction by a simple instant collision allows us to bypass the "computational bottlenecks" associated with the details of the diffusion and the dynamics of motors and the reorientation of microtubules. Consequently, we are able to perform simulations of large ensembles of microtubules and motors on a very large time scale. This simple model reproduces all important phenomenology observed in in vitro experiments: Formation of vortices for low motor density and raylike asters and bundles for higher motor density.

Details

Language :
English
ISSN :
1539-3755
Volume :
77
Issue :
5 Pt 1
Database :
MEDLINE
Journal :
Physical review. E, Statistical, nonlinear, and soft matter physics
Publication Type :
Academic Journal
Accession number :
18643100
Full Text :
https://doi.org/10.1103/PhysRevE.77.051905