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Simulation studies of self-organization of microtubules and molecular motors.
- Source :
-
Physical review. E, Statistical, nonlinear, and soft matter physics [Phys Rev E Stat Nonlin Soft Matter Phys] 2008 May; Vol. 77 (5 Pt 1), pp. 051905. Date of Electronic Publication: 2008 May 08. - Publication Year :
- 2008
-
Abstract
- We perform Monte Carlo type simulation studies of self-organization of microtubules interacting with molecular motors. We model microtubules as stiff polar rods of equal length exhibiting anisotropic diffusion in the plane. The molecular motors are implicitly introduced by specifying certain probabilistic collision rules resulting in realignment of the rods. This approximation of the complicated microtubule-motor interaction by a simple instant collision allows us to bypass the "computational bottlenecks" associated with the details of the diffusion and the dynamics of motors and the reorientation of microtubules. Consequently, we are able to perform simulations of large ensembles of microtubules and motors on a very large time scale. This simple model reproduces all important phenomenology observed in in vitro experiments: Formation of vortices for low motor density and raylike asters and bundles for higher motor density.
- Subjects :
- Computer Simulation
Dimerization
Multiprotein Complexes chemistry
Multiprotein Complexes ultrastructure
Protein Conformation
Crystallization methods
Microtubules chemistry
Microtubules ultrastructure
Models, Chemical
Models, Molecular
Molecular Motor Proteins chemistry
Molecular Motor Proteins ultrastructure
Subjects
Details
- Language :
- English
- ISSN :
- 1539-3755
- Volume :
- 77
- Issue :
- 5 Pt 1
- Database :
- MEDLINE
- Journal :
- Physical review. E, Statistical, nonlinear, and soft matter physics
- Publication Type :
- Academic Journal
- Accession number :
- 18643100
- Full Text :
- https://doi.org/10.1103/PhysRevE.77.051905