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Genome analysis of the platypus reveals unique signatures of evolution.

Authors :
Warren WC
Hillier LW
Marshall Graves JA
Birney E
Ponting CP
Grützner F
Belov K
Miller W
Clarke L
Chinwalla AT
Yang SP
Heger A
Locke DP
Miethke P
Waters PD
Veyrunes F
Fulton L
Fulton B
Graves T
Wallis J
Puente XS
López-Otín C
Ordóñez GR
Eichler EE
Chen L
Cheng Z
Deakin JE
Alsop A
Thompson K
Kirby P
Papenfuss AT
Wakefield MJ
Olender T
Lancet D
Huttley GA
Smit AF
Pask A
Temple-Smith P
Batzer MA
Walker JA
Konkel MK
Harris RS
Whittington CM
Wong ES
Gemmell NJ
Buschiazzo E
Vargas Jentzsch IM
Merkel A
Schmitz J
Zemann A
Churakov G
Kriegs JO
Brosius J
Murchison EP
Sachidanandam R
Smith C
Hannon GJ
Tsend-Ayush E
McMillan D
Attenborough R
Rens W
Ferguson-Smith M
Lefèvre CM
Sharp JA
Nicholas KR
Ray DA
Kube M
Reinhardt R
Pringle TH
Taylor J
Jones RC
Nixon B
Dacheux JL
Niwa H
Sekita Y
Huang X
Stark A
Kheradpour P
Kellis M
Flicek P
Chen Y
Webber C
Hardison R
Nelson J
Hallsworth-Pepin K
Delehaunty K
Markovic C
Minx P
Feng Y
Kremitzki C
Mitreva M
Glasscock J
Wylie T
Wohldmann P
Thiru P
Nhan MN
Pohl CS
Smith SM
Hou S
Nefedov M
de Jong PJ
Renfree MB
Mardis ER
Wilson RK
Source :
Nature [Nature] 2008 May 08; Vol. 453 (7192), pp. 175-83.
Publication Year :
2008

Abstract

We present a draft genome sequence of the platypus, Ornithorhynchus anatinus. This monotreme exhibits a fascinating combination of reptilian and mammalian characters. For example, platypuses have a coat of fur adapted to an aquatic lifestyle; platypus females lactate, yet lay eggs; and males are equipped with venom similar to that of reptiles. Analysis of the first monotreme genome aligned these features with genetic innovations. We find that reptile and platypus venom proteins have been co-opted independently from the same gene families; milk protein genes are conserved despite platypuses laying eggs; and immune gene family expansions are directly related to platypus biology. Expansions of protein, non-protein-coding RNA and microRNA families, as well as repeat elements, are identified. Sequencing of this genome now provides a valuable resource for deep mammalian comparative analyses, as well as for monotreme biology and conservation.

Details

Language :
English
ISSN :
1476-4687
Volume :
453
Issue :
7192
Database :
MEDLINE
Journal :
Nature
Publication Type :
Academic Journal
Accession number :
18464734
Full Text :
https://doi.org/10.1038/nature06936