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Virgibacillus kekensis sp. nov., a moderately halophilic bacterium isolated from a salt lake in China.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2008 Mar; Vol. 58 (Pt 3), pp. 647-53. - Publication Year :
- 2008
-
Abstract
- A Gram-positive, moderately halophilic, motile, strictly aerobic, endospore-forming, oxidase- and catalase-positive, rod-shaped bacterium, strain YIM kkny16(T), was isolated from a saline mud sample collected from the Keke salt lake in the Qaidam Basin, north-west China. This isolate grew in the presence of 0-25 % (w/v) NaCl and at pH 6.0-10.0 and 10-50 degrees C; optimum growth was observed with 10 % (w/v) NaCl and at pH 7.0 and 37 degrees C. Strain YIM kkny16(T) had meso-diaminopimelic acid as the diagnostic diamino acid, MK-7 as the predominant respiratory quinone, with a significant amount of MK-6, and anteiso-C(15 : 0), iso-C(14 : 0) and C(16 : 1)omega7c alcohol as major fatty acids. Major polar lipids were diphosphatidylglycerol and phosphatidylglycerol. The DNA G+C content was 41.8 mol%. Phylogenetic analysis based on 16S rRNA gene sequences confirmed that strain YIM kkny16(T) was a member of the genus Virgibacillus, exhibiting sequence similarities of 94.9-97.3 % to the type strains of recognized Virgibacillus species. Strain YIM kkny16(T) could be differentiated from recognized Virgibacillus species based on phenotypic characteristics, chemotaxonomic differences, phylogenetic analysis and DNA-DNA hybridization data. On the basis of evidence from this polyphasic study, strain YIM kkny16(T) is considered to represent a novel species of the genus Virgibacillus, for which the name Virgibacillus kekensis sp. nov. is proposed. The type strain is YIM kkny16(T) (=DSM 17056(T)=CGMCC 1.6298(T)).
- Subjects :
- Bacillaceae genetics
Bacillaceae physiology
Bacterial Typing Techniques
Base Composition
China
DNA, Bacterial analysis
DNA, Ribosomal analysis
Fatty Acids analysis
Genes, rRNA
Molecular Sequence Data
Nucleic Acid Hybridization
Phenotype
Phylogeny
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Species Specificity
Bacillaceae classification
Bacillaceae isolation & purification
Fresh Water microbiology
Sodium Chloride
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5026
- Volume :
- 58
- Issue :
- Pt 3
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 18319472
- Full Text :
- https://doi.org/10.1099/ijs.0.65365-0