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Jannaschia pohangensis sp. nov., isolated from seashore sand in Korea.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2008 Feb; Vol. 58 (Pt 2), pp. 496-9. - Publication Year :
- 2008
-
Abstract
- A Gram-negative, aerobic bacterium, H1-M8(T), was isolated from seashore sand in Korea and then characterized using a polyphasic approach. Cells were short rods (0.7-1.0 x 1.5-2.0 microm) and were motile (each cell having at least one flagellum). Colonies were light-brown, non-pigmented, circular and convex with clear margins. Growth of the strain was observed at 5-35 degrees C, pH 6.0-9.0 and NaCl concentrations up to 8.4 % (w/v). Phylogenetic analysis of the 16S rRNA gene sequence revealed a clear affiliation between the novel strain and members of the genus Jannaschia. The sequence similarities between H1-M8(T) and type strains of the genus Jannaschia ranged from 97.0 to 97.8 %. However, DNA-DNA hybridizations between the isolate and type strains of other related species produced low values (21-38 %). The major isoprenoid quinone was Q-10 and the predominant cellular fatty acids were 18 : 1omega7c (68.2 %) and 18 : 0 (10.5 %). The G+C content of the DNA was 63.6 mol%. On the basis of physiological, biochemical and chemotaxonomic traits and data from the comparative 16S rRNA sequence analysis, strain H1-M8(T) represents a novel species of the genus Jannaschia, for which the name Jannaschia pohangensis sp. nov. is proposed. The type strain is H1-M8(T) (=KACC 11609(T) =DSM 19073(T)).
- Subjects :
- Bacterial Typing Techniques
Base Composition
DNA, Bacterial analysis
Fatty Acids analysis
Genes, rRNA
Korea
Molecular Sequence Data
Nucleic Acid Hybridization
Phenotype
Phylogeny
RNA, Ribosomal, 16S
Rhodobacteraceae genetics
Rhodobacteraceae physiology
Sequence Analysis, DNA
Species Specificity
Rhodobacteraceae classification
Rhodobacteraceae isolation & purification
Silicon Dioxide
Soil Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5026
- Volume :
- 58
- Issue :
- Pt 2
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 18218956
- Full Text :
- https://doi.org/10.1099/ijs.0.65167-0