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Deinococcus misasensis and Deinococcus roseus, novel members of the genus Deinococcus, isolated from a radioactive site in Japan.
- Source :
-
Systematic and applied microbiology [Syst Appl Microbiol] 2008 Mar; Vol. 31 (1), pp. 43-9. Date of Electronic Publication: 2007 Dec 21. - Publication Year :
- 2008
-
Abstract
- Two gamma- and UV-radiation resistant, Gram-positive, red- or pink-pigmented, rod-shaped, strictly aerobic, oxidase- and catalase-positive bacterial strains, TDMA-25T and TDMA-uv51T, were isolated from fresh water collected at Misasa, a radioactive site in Japan. Phylogenetic analysis based on 16S rRNA gene sequences placed both in a distinct lineage in the family Deinococcaceae, and the highest degrees of sequence similarity determined belonged to Deinococcus maricopensis LB-34T (88.8-89.3%), Deinococcus pimensis KR-235T (86.4-86.7%) and Deinococcus yavapaiensis KR-236T (86.1%). The DNA G+C content of the strains was 53-58 mol%. The major respiratory quinone was MK-8. The predominant fatty acids were C15:0 iso, C16:0 iso, C13:0 iso, C17:0 iso, C16:0, C13:0 anteiso, C15:0 and C12:0 iso. The strains degraded gelatin, casein, starch and Tween 80. Unique physiological characteristics, differences in their fatty acid profiles, and genotypic and phylogenetic features, differentiated strains TDMA-25T and TDMA-uv51T from closely related Deinococcus species. Hence, the two strains are described as novel species of the genus Deinococcus. The names Deinococcus misasensis sp. nov. (type strain TDMA-25T=JCM 14369=NBRC 102116=CCUG 53610) and Deinococcus roseus sp. nov. (type strain TDMA-uv51T=JCM 14370=NBRC 102117=CCUG 53611) are proposed.
- Subjects :
- Aerobiosis
Bacterial Typing Techniques
Base Composition
Catalase metabolism
DNA, Bacterial chemistry
DNA, Bacterial genetics
DNA, Ribosomal chemistry
DNA, Ribosomal genetics
Deinococcus genetics
Deinococcus radiation effects
Fatty Acids analysis
Gamma Rays
Genes, rRNA
Japan
Molecular Sequence Data
Oxidoreductases metabolism
Phylogeny
Pigments, Biological biosynthesis
Quinones analysis
RNA, Bacterial genetics
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Sequence Homology, Nucleic Acid
Ultraviolet Rays
Deinococcus classification
Deinococcus isolation & purification
Water Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 0723-2020
- Volume :
- 31
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Systematic and applied microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 18096345
- Full Text :
- https://doi.org/10.1016/j.syapm.2007.10.002