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Genome and polypeptides characterization of Tellina virus 1 reveals a fifth genetic cluster in the Birnaviridae family.
- Source :
-
Virology [Virology] 2008 Feb 20; Vol. 371 (2), pp. 350-61. Date of Electronic Publication: 2007 Oct 31. - Publication Year :
- 2008
-
Abstract
- We characterized tellina virus 1 (TV-1), a birnavirus isolated from the marine bivalve mollusk Tellina tenuis. Genome sequence analysis established that TV-1 is representative of a viral cluster distant from other birnaviruses. The maturation process of the polyprotein encoded by the genomic segment A was delineated with the identification of the N-termini of the viral protease VP4 and the ribonucleoprotein VP3, and the characterization of peptides deriving from the processing of pVP2, the VP2 capsid protein precursor. One of these peptides was shown to possess a membrane-disrupting domain. Like the blotched snakehead virus, the polyprotein exhibits a non-structural polypeptide (named [X]) located between pVP2 and VP4. Mutagenesis analysis allowed the identification in VP4 of a catalytic Ser-Lys dyad that does not possess the common Gly-X-Ser signature of the serine hydrolases. The genomic segment B encodes the viral RNA-dependent RNA-polymerase VP1 with the unique sequence motif arrangement identified in other birnavirus VP1s.
- Subjects :
- Amino Acid Sequence
Animals
Aquabirnavirus chemistry
Aquabirnavirus genetics
Aquabirnavirus metabolism
Birnaviridae genetics
Cell Line, Tumor
Cloning, Molecular
Models, Molecular
Molecular Sequence Data
Peptides chemistry
Peptides genetics
Peptides metabolism
Serine Endopeptidases metabolism
Viral Proteins chemistry
Viral Proteins genetics
Viral Proteins metabolism
Aquabirnavirus classification
Birnaviridae classification
Bivalvia virology
Genome, Viral
Polyproteins chemistry
Polyproteins genetics
Polyproteins metabolism
Sequence Analysis, DNA
Subjects
Details
- Language :
- English
- ISSN :
- 0042-6822
- Volume :
- 371
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- Virology
- Publication Type :
- Academic Journal
- Accession number :
- 17976679
- Full Text :
- https://doi.org/10.1016/j.virol.2007.09.022