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Molecular building kit of fused-proline-derived peptide mimetics allowing specific adjustment of the dihedral Psi angle.
- Source :
-
The Journal of organic chemistry [J Org Chem] 2007 Nov 23; Vol. 72 (24), pp. 9102-13. Date of Electronic Publication: 2007 Oct 24. - Publication Year :
- 2007
-
Abstract
- Proline-derived peptide mimetics have become an area of paramount importance in peptide and protein chemistry. Since protein crystal structures frequently display Psi angles of 140-170 degrees for prolyl moieties, our intention was to design a completely novel series of 2,3-fused-proline-derived lactams covering this particular conformational space. Extending our recently described toolset of spirocyclic reverse-turn mimetics, we synthesized pyrrolidinyl-fused seven-, eight-, and nine-membered unsaturated lactam model peptides taking advantage of Grubbs' ring-closing metathesis. Investigating the seven-membered lactam 3a by means of IR and NMR spectroscopy and semiempirical molecular dynamics simulations, we could not observe a U-turn conformation; however, increasing the ring size to give eight- and nine-membered congeners revealed moderate and high type IotaIota beta-turn inducing properties. Interestingly, the conformational properties of our model systems depend on both the ring size of the fused dehydro-Freidinger lactam and the position of the endocyclic double bond. Superior reverse-turn inducing properties could be observed for the fused azacyclononenone 3e. According to diagnostic transanular NOEs, a discrete folding principle of the lactam ring strongly deviating from the regioisomeric lactams 3c,f explains the conformational behavior. Hence, we were able to establish a molecular building kit that allows adjustments of a wide range of naturally occurring proline Psi angles and thus can be exploited to probe molecular recognition and functional properties of biological systems.
- Subjects :
- Amino Acid Sequence
Isomerism
Lactams chemical synthesis
Magnetic Resonance Spectroscopy
Molecular Sequence Data
Protein Conformation
Protein Folding
Pyrrolidines chemistry
Spectroscopy, Fourier Transform Infrared
Biomimetic Materials chemical synthesis
Peptides chemical synthesis
Proline analogs & derivatives
Subjects
Details
- Language :
- English
- ISSN :
- 0022-3263
- Volume :
- 72
- Issue :
- 24
- Database :
- MEDLINE
- Journal :
- The Journal of organic chemistry
- Publication Type :
- Academic Journal
- Accession number :
- 17958374
- Full Text :
- https://doi.org/10.1021/jo701703e