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Common polymorphisms in D12S1034 flanking genes RASSF8 and BHLHB3 are not associated with lung adenocarcinoma risk.
- Source :
-
Lung cancer (Amsterdam, Netherlands) [Lung Cancer] 2007 Apr; Vol. 56 (1), pp. 1-7. Date of Electronic Publication: 2006 Dec 27. - Publication Year :
- 2007
-
Abstract
- The reported association between D12S1034 and lung adenocarcinoma (ADCA) risk [Yanagitani N, Kohno T, Sunaga N, et al. Localization of a human lung adenocarcinoma susceptibility locus, possibly syntenic to the mouse Pas1 locus, in the vicinity of the D12S1034 locus on chromosome 12p11.2-p12.1. Carcinogenesis. 2002;23:1177-83] prompted us to carry out a case-control study in lung ADCA and healthy control subjects to test possible involvement of single-nucleotide polymorphisms (SNPs) in D12S1034 flanking genes RASSF8 and BHLHB3, whose minimal distances from D12S1034 are approximately 16-24 kb. RASSF8 contains a RAS-associated domain and is a candidate tumor suppressor, whereas BHLHB3 is a basic helix-loop-helix domain-containing protein that functions as a transcriptional repressor. We observed no significant association between common SNPs in RASSF8 (rs1546550 in the 3'-UTR and 3 intronic SNPs) and BHLHB3 (Ala298Val and rs1048155 in the 3'-UTR) with lung ADCA risk. However, patient groups carrying one or two copies of the BHLHB3 Val298 variation (i.e., Ala/Val or Val/Val genotypes) had a higher proportion of short-term survivors (hazard ratio, 1.8; 95% confidence interval, 1.2-2.7) compared with those carrying the Ala/Ala genotype. A replication study in an independent Norwegian lung cancer population of multiple cancer histotypes failed to replicate the significant association of BHLHB3 Ala298Val with survival; such association, however, was confirmed by analysis of ADCA only from both populations. Our results suggest that BHLHB3 variants may affect lung ADCA prognosis.
- Subjects :
- Adenocarcinoma mortality
Adenocarcinoma pathology
Case-Control Studies
Female
Genes, Tumor Suppressor
Genetic Predisposition to Disease
Genotype
Humans
Linkage Disequilibrium
Logistic Models
Lung Neoplasms mortality
Lung Neoplasms pathology
Male
Middle Aged
Proportional Hazards Models
Risk Factors
Survival Analysis
Adenocarcinoma genetics
Chromosomes, Human, Pair 12 genetics
Lung Neoplasms genetics
Polymorphism, Single Nucleotide genetics
Subjects
Details
- Language :
- English
- ISSN :
- 0169-5002
- Volume :
- 56
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Lung cancer (Amsterdam, Netherlands)
- Publication Type :
- Academic Journal
- Accession number :
- 17194498
- Full Text :
- https://doi.org/10.1016/j.lungcan.2006.11.008