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Paracoccus homiensis sp. nov., isolated from a sea-sand sample.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2006 Oct; Vol. 56 (Pt 10), pp. 2387-2390. - Publication Year :
- 2006
-
Abstract
- Strain DD-R11(T), isolated from a sea-sand sample from Homi Cape, Pohang city, South Korea, was a Gram-negative, aerobic, motile, non-spore-forming, rod- to ovoid-shaped bacterium. Colonies grown on marine agar were circular, convex and colourless to creamy white. Growth occurred between 10 and 40 degrees C (optimum 25-30 degrees C) and at pH 5.0-9.0 (optimum pH 6.0-8.0). The strain could grow in up to 15 % NaCl (optimum 3-5 % NaCl). According to 16S rRNA gene sequence analysis, the strain was a member of the genus Paracoccus in the Alphaproteobacteria. Sequence similarities to type strains of the genus Paracoccus were between 94.6 and 98.3 %, showing the highest sequence similarity to Paracoccus zeaxanthinifaciens ATCC 21588(T). The DNA-DNA relatedness value of strain DD-R11(T) and P. zeaxanthinifaciens ATCC 21588(T) was 27 %. Strain DD-R11(T) was characterized by having ubiquinone 10 as the major respiratory quinone and C(18 : 1)omega7c as the predominant fatty acid. The DNA G+C content was 63.0 mol%. On the basis of its phenotypic and genotypic characteristics, it is suggested that DD-R11(T) represents a novel species of the genus Paracoccus, for which the name Paracoccus homiensis sp. nov. is proposed, with DD-R11(T) (=KACC 11518(T)=DSM 17862(T)) as the type strain.
- Subjects :
- Bacterial Typing Techniques
DNA, Bacterial analysis
Fatty Acids analysis
Genotype
Korea
Molecular Sequence Data
Nucleic Acid Hybridization
Paracoccus genetics
Phenotype
Phylogeny
RNA, Ribosomal, 16S genetics
Paracoccus classification
Paracoccus isolation & purification
Silicon Dioxide
Soil Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5026
- Volume :
- 56
- Issue :
- Pt 10
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 17012567
- Full Text :
- https://doi.org/10.1099/ijs.0.64275-0